RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MMRN1Q13201 1228 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 DPYSL3Q14195 570 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 ZFYVE27Q5T4F4 411 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 AFMIDQ63HM1 303 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 C11orf63Q6NUN7 778 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 RHOT1Q8IXI2 618 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 CELF6Q96J87 481 aaKnown RBP19.77■□□□□ 0.76
DDX54-207ENST00000550016 FAM129BQ96TA1 746 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 CALN1Q9BXU9 219 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 SLC39A8Q9C0K1 460 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 RSPH9Q9H1X1 276 aaPredicted RBP19.77■□□□□ 0.76
DDX54-207ENST00000550016 HYOU1Q9Y4L1 999 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 ARHGAP42A6NI28 874 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 BUB1O43683 1085 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 KDELR1P24390 212 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 NAP1L1P55209 391 aaKnown RBP19.76■□□□□ 0.75
DDX54-207ENST00000550016 RPS14P62263 151 aaKnown RBP19.76■□□□□ 0.75
DDX54-207ENST00000550016 KIF5AQ12840 1032 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 MAP7D1Q3KQU3 841 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 ZNF776Q68DI1 518 aaPredicted RBP19.76■□□□□ 0.75
DDX54-207ENST00000550016 TMCO3Q6UWJ1 677 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 DAAM2Q86T65 1068 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 C11orf74Q86VG3 221 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 STK40Q8N2I9 435 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 RLN3Q8WXF3 142 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 ANP32BQ92688 251 aaKnown RBP19.76■□□□□ 0.75
DDX54-207ENST00000550016 NKD2Q969F2 451 aaPredicted RBP19.76■□□□□ 0.75
DDX54-207ENST00000550016 SPACA7Q96KW9 195 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 ZNF670Q9BS34 389 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 CEP44Q9C0F1 390 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 ITM2CQ9NQX7 267 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 ETNK2Q9NVF9 386 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 KLHL11Q9NVR0 708 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 DDX56Q9NY93 547 aaKnown RBP19.76■□□□□ 0.75
DDX54-207ENST00000550016 RAB23Q9ULC3 237 aa19.76■□□□□ 0.75
DDX54-207ENST00000550016 NRDCO43847 1150 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 CD160O95971 181 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 ACADMP11310 421 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 TNNT1P13805 278 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 PAPOLAP51003 745 aaKnown RBP19.75■□□□□ 0.75
DDX54-207ENST00000550016 ZBTB16Q05516 673 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 ELAVL3Q14576 367 aaKnown RBP19.75■□□□□ 0.75
DDX54-207ENST00000550016 ANKRD20A8PQ5CZ79 823 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 PRR23BQ6ZRT6 265 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 Q6ZVU0 165 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 ARHGAP12Q8IWW6 846 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 NPWQ8N729 165 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 SUMF1Q8NBK3 374 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 RAPGEF5Q92565 580 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 ISG20Q96AZ6 181 aaKnown RBP19.75■□□□□ 0.75
DDX54-207ENST00000550016 FAM122AQ96E09 287 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 GOLPH3Q9H4A6 298 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 USP36Q9P275 1121 aaKnown RBP19.75■□□□□ 0.75
DDX54-207ENST00000550016 MFHAS1Q9Y4C4 1052 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 FARP1Q9Y4F1 1045 aaPredicted RBP19.75■□□□□ 0.75
DDX54-207ENST00000550016 ADGRG1Q9Y653 693 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 NUMA1Q14980 2115 aa19.75■□□□□ 0.75
DDX54-207ENST00000550016 PSTPIP1O43586 416 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 LMNAP02545 664 aaKnown RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 IFI16Q16666 785 aaKnown RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 C22orf39Q6P5X5 142 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 LEKR1Q6ZMV7 388 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 DSG4Q86SJ6 1040 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 KBTBD6Q86V97 674 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 MMAAQ8IVH4 418 aaKnown RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 FAM160A2Q8N612 972 aaPredicted RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 PCDH20Q8N6Y1 951 aaKnown RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 PCDH19Q8TAB3 1148 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 CASKIN2Q8WXE0 1202 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 OR8D1Q8WZ84 308 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 ZC3H10Q96K80 434 aaKnown RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 CCDC114Q96M63 670 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 CYP8B1Q9UNU6 501 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 SMG5Q9UPR3 1016 aaKnown RBP19.74■□□□□ 0.75
DDX54-207ENST00000550016 ACTL7AQ9Y615 435 aa19.74■□□□□ 0.75
DDX54-207ENST00000550016 IGHV1OR15-9A0A0B4J2B8 117 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 LRRD1A4D1F6 860 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 ZNF487B1APH4 448 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 DFFAO00273 331 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 MCF2LO15068 1137 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 ALOX15BO15296 676 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 MAP3K13O43283 966 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 BNIP3LO60238 219 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 PRAMEF11O60813 436 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 DNTTP04053 509 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 OXTRP30559 389 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 SERPINB6P35237 376 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 PLA2G5P39877 138 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 RECQLP46063 649 aaPredicted RBP19.73■□□□□ 0.75
DDX54-207ENST00000550016 TPMTP51580 245 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 CCZ1BP86790 482 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 CCZ1P86791 482 aaPredicted RBP19.73■□□□□ 0.75
DDX54-207ENST00000550016 CST6Q15828 149 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 INO80DQ53TQ3 878 aaPredicted RBP19.73■□□□□ 0.75
DDX54-207ENST00000550016 ODF2Q5BJF6 829 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 SLC36A4Q6YBV0 504 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 VSIG1Q86XK7 387 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 CACUL1Q86Y37 369 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 FRMD1Q8N878 549 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 OR2A12Q8NGT7 310 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms