RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PCDH20Q8N6Y1 951 aaKnown RBP12.16□□□□□ -0.46
PFDN5-208ENST00000549995 PCDH19Q8TAB3 1148 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 ATRIPQ8WXE1 791 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 FATE1Q969F0 183 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 HMCESQ96FZ2 354 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 RPL10LQ96L21 214 aaKnown RBP12.16□□□□□ -0.46
PFDN5-208ENST00000549995 ITM2CQ9NQX7 267 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 ETNK2Q9NVF9 386 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 DDX56Q9NY93 547 aaKnown RBP12.16□□□□□ -0.46
PFDN5-208ENST00000549995 R4GN57 208 aa12.16□□□□□ -0.46
PFDN5-208ENST00000549995 PIEZO1Q92508 2521 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 ANKRD36A6QL64 1941 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 IGHV1OR15-9A0A0B4J2B8 117 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 MCF2LO15068 1137 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 SMAD6O43541 496 aaKnown RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 RPP40O75818 363 aaKnown RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 GSRP00390 522 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 CTNNA2P26232 953 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 CTNNA1P35221 906 aaKnown RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 BYSLQ13895 437 aaKnown RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 DLG2Q15700 870 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 USP39Q53GS9 565 aaKnown RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 ANKRD20A8PQ5CZ79 823 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF776Q68DI1 518 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-208ENST00000549995 NCBP2-AS2Q69YL0 99 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 SLC9A4Q6AI14 798 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 USP30Q70CQ3 517 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 TMPRSS6Q8IU80 811 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 KATNAL2Q8IYT4 538 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 PQLC3Q8N755 202 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF366Q8N895 744 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 OR2A12Q8NGT7 310 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 HMGB4Q8WW32 186 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 LOXL4Q96JB6 756 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 ZNF599Q96NL3 588 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 RNF157Q96PX1 679 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 DESI2Q9BSY9 194 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 TPSD1Q9BZJ3 242 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 SLC39A8Q9C0K1 460 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 THADAQ6YHU6 1953 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 SHROOM3Q8TF72 1996 aa12.15□□□□□ -0.46
PFDN5-208ENST00000549995 A0A0U1RQJ8 604 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 GRID2IPA4D2P6 1211 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PRR23AA6NEV1 266 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 ARHGAP42A6NI28 874 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 K7ERQ8 282 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 CBX4O00257 560 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PEX11BO96011 259 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 ADH1BP00325 375 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 VAV1P15498 845 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 AMPD1P23109 780 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PTPN7P35236 360 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PLA2G5P39877 138 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 IL10RBQ08334 325 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 KIF5AQ12840 1032 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 KRT81Q14533 505 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 RFTN1Q14699 578 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PLK5Q496M5 336 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 TMCO4Q5TGY1 634 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PEAR1Q5VY43 1037 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PMS2CLQ68D20 193 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 IL31Q6EBC2 164 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 TMCO3Q6UWJ1 677 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 RAPGEF5Q92565 580 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 SIPA1Q96FS4 1042 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 SPON2Q9BUD6 331 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 TSGA10Q9BZW7 698 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PCED1AQ9H1Q7 454 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 PABPC3Q9H361 631 aaKnown RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 MTG2Q9H4K7 406 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 MBD1Q9UIS9 605 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-208ENST00000549995 HPCAL4Q9UM19 191 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 MFHAS1Q9Y4C4 1052 aa12.14□□□□□ -0.47
PFDN5-208ENST00000549995 TMEM110-MUSTN1A8MSY1 372 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 DAPK3O43293 454 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 SPOPO43791 374 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 MFSD11O43934 449 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 CTSLP07711 333 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 C5AR1P21730 350 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 OXTRP30559 389 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 CDKN2BP42772 138 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PEX5P50542 639 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PAPOLAP51003 745 aaKnown RBP12.13□□□□□ -0.47
PFDN5-208ENST00000549995 TPMTP51580 245 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 ZNF33AQ06730 810 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 GALNT2Q10471 571 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 CST6Q15828 149 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PPP2R5EQ16537 467 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 IFI16Q16666 785 aaKnown RBP12.13□□□□□ -0.47
PFDN5-208ENST00000549995 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms