RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 SUN1O94901 812 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 ABHD2P08910 425 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 NFKB1P19838 968 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 PHBP35232 272 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 GEMP55040 296 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 RFTN1Q14699 578 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 CCDC38Q502W7 563 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 FNBP1LQ5T0N5 605 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 LRRC8BQ6P9F7 803 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 GPR149Q86SP6 731 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 LINC00523Q86TU6 105 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 BBS7Q8IWZ6 715 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 PALM2Q8IXS6 379 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 ZBED8Q8IZ13 594 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 KRT222Q8N1A0 295 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 CARNMT1Q8N4J0 409 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 EFHBQ8N7U6 833 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 C12orf76Q8N812 135 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 CNTD1Q8N815 330 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 PDCD7Q8N8D1 485 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 ZNF557Q8N988 423 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 TTC16Q8NEE8 873 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 VN1R2Q8NFZ6 395 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 USP13Q92995 863 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 C9orf72Q96LT7 481 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 TMEM109Q9BVC6 243 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 ROPN1BQ9BZX4 212 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 ROPN1Q9HAT0 212 aaPredicted RBP13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.17
CALCOCO1-214ENST00000549613 SHROOM3Q8TF72 1996 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 A0A087WUV0 522 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 GOLGA8KD6RF30 607 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 J3KR12 359 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 AGPSO00116 658 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 NRG2O14511 850 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 SPAG6O75602 509 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 AP2A1O95782 977 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 PEX11BO96011 259 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 GSTA2P09210 222 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 HOXB8P17481 243 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 CEBPBP17676 345 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 FSHRP23945 695 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 ACVRL1P37023 503 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 MMP13P45452 471 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 SGSHP51688 502 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 STAT4Q14765 748 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 CEP85LQ5SZL2 805 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 RNF219Q5W0B1 726 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 NAPEPLDQ6IQ20 393 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 CAND1Q86VP6 1230 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 CCNJLQ8IV13 435 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 ARID3BQ8IVW6 561 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 KLHDC8BQ8IXV7 354 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 ATP11CQ8NB49 1132 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 PABPC5Q96DU9 382 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 ACE2Q9BYF1 805 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 MUC3BQ9H195 1237 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 SLC25A51Q9H1U9 297 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 EPB41L4BQ9H329 900 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 KIAA1522Q9P206 1035 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 NFS1Q9Y697 457 aa13.95□□□□□ -0.18
CALCOCO1-214ENST00000549613 SDR42E2A6NKP2 422 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ACSL3O95573 720 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 CPP00450 1065 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 HLA-DQB2P05538 268 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 IVLP07476 585 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 CES1P23141 567 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ELK3P41970 407 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 NPY2RP49146 381 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 GAD2Q05329 585 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ITKQ08881 620 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 SLC10A7Q0GE19 358 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 HYAL1Q12794 435 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 USP4Q13107 963 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 SLC12A1Q13621 1099 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 CDH18Q13634 790 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZNF77Q15935 545 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 LRIT3Q3SXY7 679 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 TCEAL5Q5H9L2 206 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 RARS2Q5T160 578 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 SYCP2LQ5T4T6 812 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 CXorf57Q6NSI4 855 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ANKRD54Q6NXT1 300 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 FBXO36Q8NEA4 188 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 OR7D4Q8NG98 312 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ITFG1Q8TB96 612 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 NAT9Q9BTE0 207 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 SMG9Q9H0W8 520 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 VPS37BQ9H9H4 285 aa13.94□□□□□ -0.18
CALCOCO1-214ENST00000549613 PPCSQ9HAB8 311 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms