RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PLEKHA2Q9HB19 425 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 PREBQ9HCU5 417 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 RASSF1Q9NS23 344 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 ZSCAN32Q9NX65 697 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 LCTP09848 1927 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 KIAA0100Q14667 2235 aaKnown RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 FFAR3O14843 346 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 TDP2O95551 362 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 SNAI1O95863 264 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 MMP1P03956 469 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 TK1P04183 234 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 SPATA31D3P0C874 917 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 CCND3P30281 292 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 ACTN2P35609 894 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 MRPL12P52815 198 aaKnown RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 ACTR2P61160 394 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 MXRA7P84157 204 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 MGAT5BQ3V5L5 792 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 ATPAF1Q5TC12 328 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 SPATA31D4Q6ZUB0 917 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 ENOSF1Q7L5Y1 443 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 R3HCC1LQ7Z5L2 792 aaKnown RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 FSTL5Q8N475 847 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 METTL25Q8N6Q8 603 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 CCDC148Q8NFR7 591 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 EIF2AQ9BY44 585 aaKnown RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 TP63Q9H3D4 680 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 PXMP2Q9NR77 195 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 SH3BP1Q9Y3L3 701 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.05□□□□□ -1.76
APAF1-208ENST00000549007 PFASO15067 1338 aa4.05□□□□□ -1.76
APAF1-208ENST00000549007 MGAMO43451 1857 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 AGAP5A6NIR3 686 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 HRKO00198 91 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 EDIL3O43854 480 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 KRT2P35908 639 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 CEBPZQ03701 1054 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 PGM5Q15124 567 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 LETM2Q2VYF4 491 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 SLC9C1Q4G0N8 1177 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 GAGE13Q4V321 117 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 EFCAB12Q6NXP0 572 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 LAYNQ6UX15 382 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 ADAMTS17Q8TE56 1095 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 TBCKQ8TEA7 893 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 SOCS4Q8WXH5 440 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 WASF1Q92558 559 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 SLC25A18Q9H1K4 315 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 GPR34Q9UPC5 381 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 CNTN6Q9UQ52 1028 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 RAD54BQ9Y620 910 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 DDX39AO00148 427 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 KLK10O43240 276 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 STRNO43815 780 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 USO1O60763 962 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 GNA11P29992 359 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 COPB2P35606 906 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 VIPR2P41587 438 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 IRAK1P51617 712 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 PGDP52209 483 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 ZNF568Q3ZCX4 644 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 ARL6IP4Q66PJ3 421 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 DPY19L3Q6ZPD9 716 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 CBLL1Q75N03 491 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 GAS2L3Q86XJ1 694 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 COLGALT2Q8IYK4 626 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 ADAMTS18Q8TE60 1221 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 CCDC12Q8WUD4 166 aaPredicted RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 SMOQ99835 787 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 NUDT16L1Q9BRJ7 211 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 WDR11Q9BZH6 1224 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 RNPEPQ9H4A4 650 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 PCDHB16Q9NRJ7 776 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 MRGBPQ9NV56 204 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 HAUS2Q9NVX0 235 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 RAB21Q9UL25 225 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 MTMR6Q9Y217 621 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 USP15Q9Y4E8 981 aaPredicted RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 ZNFX1Q9P2E3 1918 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 ESYT2A0FGR8 921 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 PRR5-ARHGAP8B1AHC4 643 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 FAM86B1E9PN63 330 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 STX6O43752 255 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 SLC37A4O43826 429 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 B4GALT3O60512 393 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 CSF1P09603 554 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 FAM86B2P0C5J1 330 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 HOXD10P28358 340 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 SF3A3Q12874 501 aaKnown RBP eCLIP4.04□□□□□ -1.76
APAF1-208ENST00000549007 MEA1Q16626 185 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 ANKRD40Q6AI12 368 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 FAM111BQ6SJ93 734 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 C4orf50Q6ZRC1 276 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 B4GALNT4Q76KP1 1039 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 TRMT1LQ7Z2T5 733 aaKnown RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 ZNF761Q86XN6 746 aaPredicted RBP4.04□□□□□ -1.76
APAF1-208ENST00000549007 SPARTQ8N0X7 666 aa4.04□□□□□ -1.76
APAF1-208ENST00000549007 ABRAQ8N0Z2 381 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms