RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ADH1BP00325 375 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 ENGP17813 658 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 MIPP30301 263 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 L1CAMP32004 1257 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 MAPKAPK2P49137 400 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 TPI1P60174 286 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 ARF5P84085 180 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 DUOXA1Q1HG43 343 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 UAP1L1Q3KQV9 507 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 C22orf39Q6P5X5 142 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 ALKBH5Q6P6C2 394 aaKnown RBP16.13■□□□□ 0.17
DDX54-205ENST00000548786 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.13■□□□□ 0.17
DDX54-205ENST00000548786 ZNF783Q6ZMS7 281 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 NETO2Q8NC67 525 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 CHST14Q8NCH0 376 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 CADM4Q8NFZ8 388 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 SNRNP25Q9BV90 132 aaKnown RBP16.13■□□□□ 0.17
DDX54-205ENST00000548786 NUP85Q9BW27 656 aa16.13■□□□□ 0.17
DDX54-205ENST00000548786 MRPL47Q9HD33 250 aaKnown RBP16.13■□□□□ 0.17
DDX54-205ENST00000548786 PRPSAP2O60256 369 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 ZMPSTE24O75844 475 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 CTSLP07711 333 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 TPM1P09493 284 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 TCF4P15884 667 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 SERPINH1P50454 418 aaKnown RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 TRIM14Q14142 442 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 POLD3Q15054 466 aaPredicted RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 SMTNL2Q2TAL5 461 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 PPP6R3Q5H9R7 873 aaPredicted RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 PEAR1Q5VY43 1037 aaPredicted RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 RETSATQ6NUM9 610 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 SLC23A3Q6PIS1 610 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 NCEH1Q6PIU2 408 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 LAYNQ6UX15 382 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 USP30Q70CQ3 517 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 DSG4Q86SJ6 1040 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 RTL3Q8N8U3 475 aaKnown RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 OR8K1Q8NGG5 319 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 OR2A12Q8NGT7 310 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 OR14C36Q8NHC7 312 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 PIP4K2CQ8TBX8 421 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 BIRC7Q96CA5 298 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 KCTD15Q96SI1 283 aaPredicted RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 DNAJC7Q99615 494 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 RTKNQ9BST9 563 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 PACSIN1Q9BY11 444 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 TM6SF2Q9BZW4 377 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 TRIM5Q9C035 493 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 ZWILCHQ9H900 591 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 SGK2Q9HBY8 427 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 EVLQ9UI08 416 aaPredicted RBP16.12■□□□□ 0.17
DDX54-205ENST00000548786 ANAPC7Q9UJX3 599 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 SCML1Q9UN30 329 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 PI4KAP42356 2102 aa16.12■□□□□ 0.17
DDX54-205ENST00000548786 RNF103O00237 685 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 EEF2KO00418 725 aaKnown RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 KPNA3O00505 521 aaPredicted RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 MFAP3LO75121 409 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 LRCH4O75427 683 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 SERPINF2P08697 491 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 GNSP15586 552 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 C5AR1P21730 350 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 SDHBP21912 280 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 DRD3P35462 400 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 DPP6P42658 865 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 ATXN3P54252 364 aaPredicted RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 GALCP54803 685 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 SEMA3BQ13214 749 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 KCNT1Q5JUK3 1230 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 ERMARDQ5T6L9 678 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 CYP4V2Q6ZWL3 525 aaPredicted RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 RYBPQ8N488 228 aaPredicted RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 OR6K2Q8NGY2 324 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 CEP76Q8TAP6 659 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 HSPH1Q92598 858 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 HMCESQ96FZ2 354 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 CELF6Q96J87 481 aaKnown RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 KLC2Q9H0B6 622 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 NOL6Q9H6R4 1146 aaKnown RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 TMEM9BQ9NQ34 198 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 ABHD10Q9NUJ1 306 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 ZNHIT6Q9NWK9 470 aaKnown RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 HPCAL4Q9UM19 191 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 SLC6A14Q9UN76 642 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.11■□□□□ 0.17
DDX54-205ENST00000548786 SPTBN2O15020 2390 aa16.11■□□□□ 0.17
DDX54-205ENST00000548786 CACNA1AO00555 2505 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 C1QTNF3-AMACRE9PGA6 284 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 CDX4O14627 284 aaPredicted RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 MCF2LO15068 1137 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 DAPK3O43293 454 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 BUB1O43683 1085 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 CYP1A2P05177 515 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 GOT1P17174 413 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 IL1R2P27930 398 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 HNRNPH3P31942 346 aaKnown RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 CHRNA3P32297 505 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms