RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 C5orf22Q49AR2 442 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 FAM186BQ8IYM0 893 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 TEX45Q8NA69 505 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 SCAMP5Q8TAC9 235 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 RTKNQ9BST9 563 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 IL25Q9H293 177 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 PRDM8Q9NQV8 689 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 TXLNGQ9NUQ3 528 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 CDC23Q9UJX2 597 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 OSGIN2Q9Y236 505 aa4.32□□□□□ -1.72
CCDC38-206ENST00000548771 TAF1P21675 1872 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 SMTNL1A8MU46 457 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 LGALS16A8MUM7 142 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 HSPB6O14558 160 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 PPM1GO15355 546 aaPredicted RBP4.31□□□□□ -1.72
CCDC38-206ENST00000548771 LIASO43766 372 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 THPOP40225 353 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 PCP4P48539 62 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 AMTP48728 403 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 CYP2J2P51589 502 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 OAZ1P54368 228 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 TRAF2Q12933 501 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 SYTL3Q4VX76 610 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 HEPHL1Q6MZM0 1159 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 TRIM74Q86UV6 250 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 TRIM73Q86UV7 250 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 SLC44A2Q8IWA5 706 aaPredicted RBP4.31□□□□□ -1.72
CCDC38-206ENST00000548771 C2CD4CQ8TF44 421 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 NR4A3Q92570 626 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 TNIP3Q96KP6 325 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 DDX31Q9H8H2 851 aaKnown RBP4.31□□□□□ -1.72
CCDC38-206ENST00000548771 KCNG2Q9UJ96 466 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 PCDHGB1Q9Y5G3 927 aa4.31□□□□□ -1.72
CCDC38-206ENST00000548771 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 SAC3D1A6NKF1 404 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 TMCC1O94876 653 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 MYL1P05976 194 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 PRSS2P07478 247 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 FCGR2AP12318 317 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 ITGB8P26012 769 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 COMPP49747 757 aaPredicted RBP4.3□□□□□ -1.72
CCDC38-206ENST00000548771 BNC1Q01954 994 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 ILF3Q12906 894 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCDC38-206ENST00000548771 STARD3Q14849 445 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 KRTAP24-1Q3LI83 254 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 ATPAF1Q5TC12 328 aaPredicted RBP4.3□□□□□ -1.72
CCDC38-206ENST00000548771 ATG9BQ674R7 924 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 NR2C2APQ86WQ0 139 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 SCN4BQ8IWT1 228 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 HORMAD2Q8N7B1 307 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 PABPC3Q9H361 631 aaKnown RBP4.3□□□□□ -1.72
CCDC38-206ENST00000548771 NLRC4Q9NPP4 1024 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 PLSCR4Q9NRQ2 329 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 HERC5Q9UII4 1024 aaKnown RBP4.3□□□□□ -1.72
CCDC38-206ENST00000548771 C19orf53Q9UNZ5 99 aaPredicted RBP4.3□□□□□ -1.72
CCDC38-206ENST00000548771 RAP2CQ9Y3L5 183 aa4.3□□□□□ -1.72
CCDC38-206ENST00000548771 C17orf102A2RUQ5 167 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 TMEM247A6NEH6 219 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 SYT5O00445 386 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 DDNO94850 711 aaPredicted RBP4.29□□□□□ -1.72
CCDC38-206ENST00000548771 DDAH2O95865 285 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 KRT18P05783 430 aaKnown RBP4.29□□□□□ -1.72
CCDC38-206ENST00000548771 ITGA2BP08514 1039 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 LYL1P12980 280 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 PDIA3P30101 505 aaKnown RBP4.29□□□□□ -1.72
CCDC38-206ENST00000548771 AVPR2P30518 371 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 SERPINF1P36955 418 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 COASYQ13057 564 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 PFKFB4Q16877 469 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
CCDC38-206ENST00000548771 FAM216AQ8WUB2 273 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 FAR1Q8WVX9 515 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 ARRDC3Q96B67 414 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC38-206ENST00000548771 SEL1LQ9UBV2 794 aa4.29□□□□□ -1.72
CCDC38-206ENST00000548771 A0A087WV62 115 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 RNMTO43148 476 aaKnown RBP4.28□□□□□ -1.72
CCDC38-206ENST00000548771 ACTL6BO94805 426 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 CLDN7O95471 211 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 ENO3P13929 434 aaPredicted RBP4.28□□□□□ -1.72
CCDC38-206ENST00000548771 CHN1P15882 459 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 NUDT6P53370 316 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 TMPRSS3P57727 454 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 AP2B1P63010 937 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 EEF1A2Q05639 463 aaKnown RBP4.28□□□□□ -1.72
CCDC38-206ENST00000548771 GRSF1Q12849 480 aaKnown RBP eCLIP4.28□□□□□ -1.72
CCDC38-206ENST00000548771 ALKBH1Q13686 389 aaKnown RBP4.28□□□□□ -1.72
CCDC38-206ENST00000548771 IZUMO4Q1ZYL8 232 aa4.28□□□□□ -1.72
CCDC38-206ENST00000548771 LIN54Q6MZP7 749 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms