RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 DEUP1Q05D60 604 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 DPYSL3Q14195 570 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 PGAP3Q96FM1 320 aaPredicted RBP16.84■□□□□ 0.29
BRF1-208ENST00000546997 RBM15Q96T37 977 aaKnown RBP eCLIP16.84■□□□□ 0.296e-6■■■■□ 19.9
BRF1-208ENST00000546997 TRIM62Q9BVG3 475 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 MAK16Q9BXY0 300 aaKnown RBP16.84■□□□□ 0.29
BRF1-208ENST00000546997 SLCO1B3Q9NPD5 702 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 ANLNQ9NQW6 1124 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 SFMBT1Q9UHJ3 866 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 EPOPA6NHQ4 379 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 MAP3K13O43283 966 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 MAGEC1O60732 1142 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 GLUD1P00367 558 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 IFNB1P01574 187 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 IGLV3-25P01717 112 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 ZDHHC11BP0C7U3 371 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 CLCN4P51793 760 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 GDF10P55107 478 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 PLD1Q13393 1074 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 MORF4L2Q15014 288 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 PDK2Q15119 407 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 ACSBG2Q5FVE4 666 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 FOXB2Q5VYV0 432 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.84■□□□□ 0.29
BRF1-208ENST00000546997 KREMEN2Q8NCW0 462 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 NRG4Q8WWG1 115 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 ARNTL2Q8WYA1 636 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 SMOC2Q9H3U7 446 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 C10orf88Q9H8K7 445 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 COMMD8Q9NX08 183 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 RRN3Q9NYV6 651 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 MSRAQ9UJ68 235 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 MAFFQ9ULX9 164 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 COMMD3-BMI1R4GMX3 469 aa16.84■□□□□ 0.29
BRF1-208ENST00000546997 FOXO6A8MYZ6 492 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 GYG2O15488 501 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 TBX18O95935 607 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 C8AP07357 584 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 CSH1P0DML2 217 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 CSH2P0DML3 217 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 CA4P22748 312 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 IL4RP24394 825 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 EIF4EBP2Q13542 120 aaPredicted RBP16.83■□□□□ 0.28
BRF1-208ENST00000546997 RNASEH2BQ5TBB1 312 aaKnown RBP16.83■□□□□ 0.28
BRF1-208ENST00000546997 MTDHQ86UE4 582 aaKnown RBP16.83■□□□□ 0.28
BRF1-208ENST00000546997 MAP7D3Q8IWC1 876 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 TDHQ8IZJ6 230 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 MYRFLQ96LU7 910 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 RNF157Q96PX1 679 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 HAPLN3Q96S86 360 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 TRIM55Q9BYV6 548 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 TLR8Q9NR97 1041 aaKnown RBP16.83■□□□□ 0.28
BRF1-208ENST00000546997 PCMTD2Q9NV79 361 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.83■□□□□ 0.28
BRF1-208ENST00000546997 TMCO1Q9UM00 188 aa16.83■□□□□ 0.28
BRF1-208ENST00000546997 MDM4O15151 490 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 CREB3O43889 395 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 TBX10O75333 385 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 PIM1P11309 404 aaPredicted RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 KRT15P19012 456 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 RPA3P35244 121 aaPredicted RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 EIF3EP60228 445 aaKnown RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 TFDP2Q14188 446 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 KRT81Q14533 505 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 RAB30Q15771 203 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 DNAJB7Q7Z6W7 309 aaPredicted RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 ZC3H18Q86VM9 953 aaKnown RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 UNC45BQ8IWX7 931 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 RNF139Q8WU17 664 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 RSAD2Q8WXG1 361 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 PSMG2Q969U7 264 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 MCUR1Q96AQ8 359 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 C9orf72Q96LT7 481 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 CCSER2Q9H7U1 834 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 CLIC5Q9NZA1 410 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 PSMC3IPQ9P2W1 217 aaPredicted RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 GRID1Q9ULK0 1009 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 AP4E1Q9UPM8 1137 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 TBC1D30Q9Y2I9 924 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 EYSQ5T1H1 3165 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 EIF4E1BA6NMX2 242 aaKnown RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 PER2O15055 1255 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 IRAK2O43187 625 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 SPAG7O75391 227 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 GSTT1P30711 240 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 EPHB3P54753 998 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 NOMO1Q15155 1222 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 RFWD3Q6PCD5 774 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 NPNTQ6UXI9 565 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 ADGRD2Q7Z7M1 963 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 PYROXD2Q8N2H3 581 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 TRMT2BQ96GJ1 504 aaKnown RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 ZNF512Q96ME7 567 aaPredicted RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 CENPKQ9BS16 269 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 PCDH18Q9HCL0 1135 aa16.82■□□□□ 0.28
BRF1-208ENST00000546997 ZNF334Q9HCZ1 680 aaPredicted RBP16.82■□□□□ 0.28
BRF1-208ENST00000546997 IRAK4Q9NWZ3 460 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms