RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 A0A1W2PQJ5 194 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 C2CD4BA6NLJ0 364 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PRR5-ARHGAP8B1AHC4 643 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 AP5Z1O43299 807 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CBFA2T2O43439 604 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 RNASEH1O60930 286 aaKnown RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 NDUFS2O75306 463 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 MAP3K6O95382 1288 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 SRPRAP08240 638 aaKnown RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 GZMAP12544 262 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 HLA-EP13747 358 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 TFE3P19532 575 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 GPD1P21695 349 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PRKCHP24723 683 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 OXTRP30559 389 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CSKP41240 450 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PRKCIP41743 596 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 DPP6P42658 865 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PTPN9P43378 593 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 DHPSP49366 369 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PLK1P53350 603 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 ARHGAP8P85298 464 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 ECT2LQ008S8 904 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CREB5Q02930 508 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 LMNB2Q03252 620 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PLAURQ03405 335 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 HYAL2Q12891 473 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PTP4A2Q12974 167 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CAMK2GQ13555 558 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 NFKBIBQ15653 356 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CSRP2Q16527 193 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PCSK7Q16549 785 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CDO1Q16878 200 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PLEKHG6Q3KR16 790 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 C5orf22Q49AR2 442 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 FSCBQ5H9T9 825 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PITRM1Q5JRX3 1037 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 OTUD1Q5VV17 481 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 PMS2CLQ68D20 193 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 DNAJC24Q6P3W2 148 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 DCUN1D2Q6PH85 259 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 WDR59Q6PJI9 974 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 MON1BQ7L1V2 547 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 STRADAQ7RTN6 431 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 BNIPLQ7Z465 357 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 VPS36Q86VN1 386 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 FAM131BQ86XD5 332 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 TMPRSS6Q8IU80 811 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 GALNT12Q8IXK2 581 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 MCOLN2Q8IZK6 566 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 KDM1BQ8NB78 822 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 OR13H1Q8NG92 308 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 OR2T3Q8NH03 318 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 IGSF8Q969P0 613 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 ERLEC1Q96DZ1 483 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 MYEOVQ96EZ4 313 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 SIPA1Q96FS4 1042 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 LMLNQ96KR4 655 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 MRGPRX1Q96LB2 322 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 TTYH3Q9C0H2 523 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 TMEM245Q9H330 911 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 CD248Q9HCU0 757 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 SEMA4GQ9NTN9 838 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 IFNKQ9P0W0 207 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 INTS6Q9UL03 887 aaKnown RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 ERVW-1Q9UQF0 538 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 LUC7L2Q9Y383 392 aaKnown RBP7.58□□□□□ -1.2
CPSF7-224ENST00000544990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.58□□□□□ -1.24e-11■■□□□ 12.6
CPSF7-224ENST00000544990 AK5Q9Y6K8 562 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 DOCK4Q8N1I0 1966 aa7.58□□□□□ -1.2
CPSF7-224ENST00000544990 OTOGLQ3ZCN5 2332 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 BCLAF3A2AJT9 711 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TARSL2A2RTX5 802 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 DRGXA6NNA5 263 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TMCO5BA8MYB1 307 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 EREGO14944 169 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 MMP20O60882 483 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 SRGAP2O75044 1071 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 RTN2O75298 545 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 DNTTP04053 509 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 RHOCP08134 193 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF806P0C7X5 589 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 BMP4P12644 408 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 BCKDHBP21953 392 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 MPLP40238 635 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 PBX1P40424 430 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF143P52747 638 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ATXN1P54253 815 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 KRT83P78385 493 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ZBED6P86452 979 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 RPL6Q02878 288 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ZBTB16Q05516 673 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 C15orf59Q2T9L4 293 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 CCDC14Q49A88 953 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TDRD12Q587J7 1177 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TRNP1Q6NT89 227 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 PRR23CQ6ZRP0 262 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms