RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 DPY30Q9C005 99 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 MUC3BQ9H195 1237 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 VAV3Q9UKW4 847 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 RAB26Q9ULW5 256 aa19.64■□□□□ 0.74
SUDS3-204ENST00000543473 CYB561D2O14569 222 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 SLC2A3P11169 496 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 MMP8P22894 467 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 ATP5F1P24539 256 aaPredicted RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 CCR1P32246 355 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 EPS8Q12929 822 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 FBXO47Q5MNV8 452 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 FNBP1LQ5T0N5 605 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 RNASEH2BQ5TBB1 312 aaKnown RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 FAM45BPQ6NSW5 357 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 DNAJC14Q6Y2X3 702 aaPredicted RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 SATL1Q86VE3 508 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 OR5B17Q8NGF7 314 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 COQ7Q99807 217 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 RIBC2Q9H4K1 309 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 WDR55Q9H6Y2 383 aaPredicted RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 PTTG2Q9NZH5 202 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 LMO7Q8WWI1 1683 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 ACKR2O00590 384 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 SHROOM1Q2M3G4 852 aaPredicted RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 GLB1LQ6UWU2 654 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 CMC1Q7Z7K0 106 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 ZNF276Q8N554 614 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 NKX2-3Q8TAU0 364 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 VAT1Q99536 393 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 CACNA2D2Q9NY47 1150 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 CHD2O14647 1828 aaKnown RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 TAF4O00268 1085 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 TADA2AO75478 443 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 LBPP18428 481 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 TTLL9Q3SXZ7 439 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 TATDN1Q6P1N9 297 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 ASB2Q96Q27 587 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 SPATA16Q9BXB7 569 aa19.64■□□□□ 0.73
SUDS3-204ENST00000543473 H2AFY2Q9P0M6 372 aaPredicted RBP19.64■□□□□ 0.73
SUDS3-204ENST00000543473 BCL9LQ86UU0 1499 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 AARS2Q5JTZ9 985 aaKnown RBP19.63■□□□□ 0.73
SUDS3-204ENST00000543473 RNF180Q86T96 592 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 OMDQ99983 421 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 CRLS1Q9UJA2 301 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 EFR3BQ9Y2G0 817 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 H0YGN5 161 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 ZNF286BP0CG31 522 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 SOAT1P35610 550 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 PGS1Q32NB8 556 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 C6orf52Q5T4I8 152 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 LIPMQ5VYY2 423 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 NEPROQ6NW34 567 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 UTP15Q8TED0 518 aaKnown RBP19.63■□□□□ 0.73
SUDS3-204ENST00000543473 MFSD14AQ96MC6 490 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 ACOX2Q99424 681 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 CINPQ9BW66 212 aaPredicted RBP19.63■□□□□ 0.73
SUDS3-204ENST00000543473 SELENONQ9NZV5 590 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 SPASTQ9UBP0 616 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 PRKAG3Q9UGI9 489 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 PNMA8BQ9ULN7 279 aaPredicted RBP19.63■□□□□ 0.73
SUDS3-204ENST00000543473 NFS1Q9Y697 457 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 DHRS12A0PJE2 317 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 LACTBL1A8MY62 500 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 CCNB1P14635 433 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 MSH3P20585 1137 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 PTP4A2Q12974 167 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 SIX2Q9NPC8 291 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 LNPEPQ9UIQ6 1025 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 A0A087X1B8 175 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 ATXN8OSP0DMR3 200 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 HELQQ8TDG4 1101 aa19.63■□□□□ 0.73
SUDS3-204ENST00000543473 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
SUDS3-204ENST00000543473 VPS4BO75351 444 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 INSRRP14616 1297 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 ADORA2AP29274 412 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 AQP4P55087 323 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 ZC3H12AQ5D1E8 599 aaKnown RBP19.62■□□□□ 0.73
SUDS3-204ENST00000543473 PLEKHM3Q6ZWE6 761 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 BPIFB6Q8NFQ5 453 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 KCTD4Q8WVF5 259 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 OMA1Q96E52 524 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 MORF4L1Q9UBU8 362 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 MTA2O94776 668 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 THPOP40225 353 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 NNMTP40261 264 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 TNK2Q07912 1038 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 PWP1Q13610 501 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 CATSPERGQ6ZRH7 1159 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 DNAJB14Q8TBM8 379 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 ADAM32Q8TC27 787 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 NPAS2Q99743 824 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 PORCNQ9H237 461 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 TSC22D2O75157 780 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 TCEA3O75764 348 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 CYP1A1P04798 512 aaPredicted RBP19.62■□□□□ 0.73
SUDS3-204ENST00000543473 GSSP48637 474 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 SYTL3Q4VX76 610 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 SLC41A1Q8IVJ1 513 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 ATP6V0D2Q8N8Y2 350 aa19.62■□□□□ 0.73
SUDS3-204ENST00000543473 METTL6Q8TCB7 284 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms