RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 UMODL1-AS1Q8N2C9 162 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 DDX50Q9BQ39 737 aaKnown RBP28.38■■■□□ 2.13
CCM2-218ENST00000541586 CEP41Q9BYV8 373 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 NOL6Q9H6R4 1146 aaKnown RBP28.38■■■□□ 2.13
CCM2-218ENST00000541586 ECT2Q9H8V3 914 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 SPHK2Q9NRA0 654 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 DONSONQ9NYP3 566 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 STOML2Q9UJZ1 356 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 METTL18O95568 372 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 NFATC1O95644 943 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 RUNX3Q13761 415 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 KCNJ11Q14654 390 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 DHCR24Q15392 516 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 C5orf22Q49AR2 442 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 CFAP58Q5T655 872 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 FAXCQ5TGI0 409 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 ALS2CLQ60I27 953 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 ARHGAP36Q6ZRI8 547 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 CCDC13Q8IYE1 715 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 KIAA1958Q8N8K9 716 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 CSGALNACT1Q8TDX6 532 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 DDI1Q8WTU0 396 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 ACBD3Q9H3P7 528 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 ETNK1Q9HBU6 452 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 ZNF212Q9UDV6 495 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 SORCS3Q9UPU3 1222 aa28.38■■■□□ 2.13
CCM2-218ENST00000541586 GOLGA6BA6NDN3 693 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 GOLGA8MH3BSY2 632 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 SMAPO00193 183 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 MTSS1O43312 755 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 OPHN1O60890 802 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 TMEM63AO94886 807 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 ZNF33AQ06730 810 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 SPDYCQ5MJ68 293 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 ZNF567Q8N184 647 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 CFAP52Q8N1V2 620 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 ATPAF2Q8N5M1 289 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 TMA16Q96EY4 203 aaKnown RBP28.37■■■□□ 2.13
CCM2-218ENST00000541586 TSGA13Q96PP4 275 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 UHRF1Q96T88 793 aaPredicted RBP28.37■■■□□ 2.13
CCM2-218ENST00000541586 SEMA4AQ9H3S1 761 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 FAM53CQ9NYF3 392 aa28.37■■■□□ 2.13
CCM2-218ENST00000541586 PTPN3P26045 913 aa28.36■■■□□ 2.13
CCM2-218ENST00000541586 GAD2Q05329 585 aa28.36■■■□□ 2.13
CCM2-218ENST00000541586 ZIM3Q96PE6 472 aa28.36■■■□□ 2.13
CCM2-218ENST00000541586 RBM15Q96T37 977 aaKnown RBP eCLIP28.36■■■□□ 2.13
CCM2-218ENST00000541586 EPB41L4BQ9H329 900 aa28.36■■■□□ 2.13
CCM2-218ENST00000541586 PABPC3Q9H361 631 aaKnown RBP28.36■■■□□ 2.13
CCM2-218ENST00000541586 NEDD8-MDP1E9PL57 170 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 CYP17A1P05093 508 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 CCNCP24863 283 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 SGSHP51688 502 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 NDST2P52849 883 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 NR1H3Q13133 447 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 SYCP2LQ5T4T6 812 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 CPXM2Q8N436 756 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 BBS2Q9BXC9 721 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 MUTYHQ9UIF7 546 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 MYOFQ9NZM1 2061 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 ARNTLO00327 626 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 MAFKO60675 156 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 CYBBP04839 570 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 SRFP11831 508 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 PAPOLAP51003 745 aaKnown RBP28.35■■■□□ 2.13
CCM2-218ENST00000541586 FAM193AP78312 1265 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 FAM217AQ8IXS0 508 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 CPA6Q8N4T0 437 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 NAT16Q8N8M0 369 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 PRICKLE1Q96MT3 831 aaPredicted RBP28.35■■■□□ 2.13
CCM2-218ENST00000541586 PLAAQ9Y263 795 aa28.35■■■□□ 2.13
CCM2-218ENST00000541586 AGPSO00116 658 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 ADH1CP00326 375 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 MAGEA6P43360 314 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 RPS24P62847 133 aaKnown RBP28.34■■■□□ 2.13
CCM2-218ENST00000541586 ZBTB17Q13105 803 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 ITPRIPL2Q3MIP1 535 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 RABGAP1LQ5R372 815 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 CEP128Q6ZU80 1094 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 LRRC49Q8IUZ0 686 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 CDC42EP4Q9H3Q1 356 aaKnown RBP28.34■■■□□ 2.13
CCM2-218ENST00000541586 KLHL8Q9P2G9 620 aaPredicted RBP28.34■■■□□ 2.13
CCM2-218ENST00000541586 DUSP12Q9UNI6 340 aa28.34■■■□□ 2.13
CCM2-218ENST00000541586 TBL1XO60907 577 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 ADH5P11766 374 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 SOX9P48436 509 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 MAPKAPK2P49137 400 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 MPPE1Q53F39 396 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 UBAP2Q5T6F2 1119 aaKnown RBP28.33■■■□□ 2.13
CCM2-218ENST00000541586 TRMT10CQ7L0Y3 403 aaKnown RBP28.33■■■□□ 2.13
CCM2-218ENST00000541586 PID1Q7Z2X4 250 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 RELL1Q8IUW5 271 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 HEBP1Q9NRV9 189 aa28.33■■■□□ 2.13
CCM2-218ENST00000541586 SHROOM3Q8TF72 1996 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 APRTP07741 180 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 OR1E1P30953 314 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 FDFT1P37268 417 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 SEMA5AQ13591 1074 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 HIF1AQ16665 826 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 EXOC4Q96A65 974 aa28.32■■■□□ 2.12
CCM2-218ENST00000541586 HMCESQ96FZ2 354 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms