RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SERPINH1P50454 418 aaKnown RBP17.26■□□□□ 0.35
CD9-209ENST00000540891 TPI1P60174 286 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
CD9-209ENST00000540891 RETSATQ6NUM9 610 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 C22orf39Q6P5X5 142 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 USP30Q70CQ3 517 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 CPNE8Q86YQ8 564 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 SYT12Q8IV01 421 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 CADM4Q8NFZ8 388 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 OR2A12Q8NGT7 310 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 ZNF564Q8TBZ8 553 aaPredicted RBP17.26■□□□□ 0.35
CD9-209ENST00000540891 OR8D1Q8WZ84 308 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 RMDN1Q96DB5 314 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 CCDC42Q96M95 316 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
CD9-209ENST00000540891 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 CATSPERBQ9H7T0 1116 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 FBXL12Q9NXK8 326 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 SARDHQ9UL12 918 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 PPM1HQ9ULR3 514 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 RALGAPA1Q6GYQ0 2036 aa17.26■□□□□ 0.35
CD9-209ENST00000540891 DMXL1Q9Y485 3027 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 CXorf51AA0A1B0GTR3 108 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 METTL12A8MUP2 240 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 RNF103O00237 685 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 EEF2KO00418 725 aaKnown RBP17.25■□□□□ 0.35
CD9-209ENST00000540891 FGF10O15520 208 aaPredicted RBP17.25■□□□□ 0.35
CD9-209ENST00000540891 CTSLP07711 333 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 H2AFZP0C0S5 128 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 TMEM253P0C7T8 217 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 GOT1P17174 413 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 MAOBP27338 520 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 DRD3P35462 400 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 SLC25A11Q02978 314 aaKnown RBP17.25■□□□□ 0.35
CD9-209ENST00000540891 POLD3Q15054 466 aaPredicted RBP17.25■□□□□ 0.35
CD9-209ENST00000540891 SMTNL2Q2TAL5 461 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 KCNT1Q5JUK3 1230 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 H2AFVQ71UI9 128 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 UMODL1-AS1Q8N2C9 162 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 FOXJ1Q92949 421 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 FAM131CQ96AQ9 280 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 HMCESQ96FZ2 354 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 BTBD1Q9H0C5 482 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 NEUROG2Q9H2A3 272 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 TNKS2Q9H2K2 1166 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 C6orf106Q9H6K1 298 aaPredicted RBP17.25■□□□□ 0.35
CD9-209ENST00000540891 LRRC19Q9H756 370 aa17.25■□□□□ 0.35
CD9-209ENST00000540891 FCF1Q9Y324 198 aaKnown RBP17.25■□□□□ 0.35
CD9-209ENST00000540891 NUMA1Q14980 2115 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 C10orf142B7Z368 130 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 RASA4BC9J798 803 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 MYO1FO00160 1098 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 ALOX15BO15296 676 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 RASA4O43374 803 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 KDELR3O43731 214 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 BNIP3LO60238 219 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 FOXD2O60548 495 aaPredicted RBP17.24■□□□□ 0.35
CD9-209ENST00000540891 SEMA4FO95754 770 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 ADH1BP00325 375 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 IL1BP01584 269 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 RARAP10276 462 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 C5AR1P21730 350 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 SLC20A2Q08357 652 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 DPYSL2Q16555 572 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 PPP6R3Q5H9R7 873 aaPredicted RBP17.24■□□□□ 0.35
CD9-209ENST00000540891 DCAF12L1Q5VU92 463 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 RFX8Q6ZV50 586 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 HDDC3Q8N4P3 179 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 C12orf50Q8NA57 414 aaPredicted RBP17.24■□□□□ 0.35
CD9-209ENST00000540891 CHST14Q8NCH0 376 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 CTNNBL1Q8WYA6 563 aaPredicted RBP17.24■□□□□ 0.35
CD9-209ENST00000540891 DNASE2BQ8WZ79 361 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 VOPP1Q96AW1 172 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 CEP44Q9C0F1 390 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 SGK2Q9HBY8 427 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 OSGEPQ9NPF4 335 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 CWC15Q9P013 229 aaKnown RBP17.24■□□□□ 0.35
CD9-209ENST00000540891 CTTNBP2NLQ9P2B4 639 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 UVRAGQ9P2Y5 699 aa17.24■□□□□ 0.35
CD9-209ENST00000540891 EVLQ9UI08 416 aaPredicted RBP17.24■□□□□ 0.35
CD9-209ENST00000540891 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.23■□□□□ 0.35
CD9-209ENST00000540891 LNP1A1A4G5 178 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 PRR5-ARHGAP8B1AHC4 643 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 PLK4O00444 970 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 RNASEH2AO75792 299 aaKnown RBP17.23■□□□□ 0.35
CD9-209ENST00000540891 ERCC2P18074 760 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 HOXD12P35452 270 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 DPP6P42658 865 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 YBEYP58557 167 aaPredicted RBP17.23■□□□□ 0.35
CD9-209ENST00000540891 IRX4P78413 519 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 ARHGAP8P85298 464 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 DPYSQ14117 519 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 RSPO4Q2I0M5 234 aaPredicted RBP17.23■□□□□ 0.35
CD9-209ENST00000540891 AASDHQ4L235 1098 aaPredicted RBP17.23■□□□□ 0.35
CD9-209ENST00000540891 BOLA3Q53S33 107 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 TRIM61Q5EBN2 209 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 SLC23A3Q6PIS1 610 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 LEKR1Q6ZMV7 388 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 DPY19L3Q6ZPD9 716 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms