RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	OR6B2	Q6IFH4	312 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	UGT2A3	Q6UWM9	527 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DDX53	Q86TM3	631 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF354C	Q86Y25	554 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PHTF2	Q8N3S3	785 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZFP28	Q8NHY6	868 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HASPIN	Q8TF76	798 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	POF1B	Q8WVV4	589 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SMG7	Q92540	1137 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DGCR14	Q96DF8	476 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SMARCD1	Q96GM5	515 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	IGSF21	Q96ID5	467 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZNF778	Q96MU6	729 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PRPF18	Q99633	342 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	GPAM	Q9HCL2	828 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	XAB2	Q9HCS7	855 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	IL1RAPL1	Q9NZN1	696 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MAGED2	Q9UNF1	606 aa	Predicted RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	POMP	Q9Y244	141 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DTNA	Q9Y4J8	743 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STYXL1	Q9Y6J8	313 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CDK5RAP2	Q96SN8	1893 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CEP350	Q5VT06	3117 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SDR42E2	A6NKP2	422 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		E7ESA3	106 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PEX1	O43933	1283 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LRCH4	O75427	683 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	RFPL1	O75677	317 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KRT37	O76014	449 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	STBD1	O95210	358 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	APRT	P07741	180 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	GALT	P07902	379 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SERPINA6	P08185	405 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NFIC	P08651	508 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PDGFRB	P09619	1106 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SMIM18	P0DKX4	95 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	KDELR1	P24390	212 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ADORA2B	P29275	332 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HOXC8	P31273	242 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	COPA	P53621	1224 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HNRNPD	Q14103	355 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MYLK3	Q32MK0	819 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FASTKD1	Q53R41	847 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SH3PXD2A	Q5TCZ1	1133 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ATG14	Q6ZNE5	492 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TAS1R3	Q7RTX0	852 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	WDTC1	Q8N5D0	677 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LINC01465	Q8N7H1	131 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TFAP2B	Q92481	460 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C18orf25	Q96B23	403 aa	Predicted RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MOCOS	Q96EN8	888 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SUSD3	Q96L08	255 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FBXL18	Q96ME1	805 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	C7orf26	Q96N11	449 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	NRDE2	Q9H7Z3	1164 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	USP29	Q9HBJ7	922 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	OLA1	Q9NTK5	396 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CDH22	Q9UJ99	828 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TBC1D30	Q9Y2I9	924 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MRPS23	Q9Y3D9	190 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		A0A0J9YVX5	310 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TTLL13P	A6NNM8	815 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		H3BSA7	217 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DCX	O43602	365 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	DGKI	O75912	1065 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC2A3	P11169	496 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LRPAP1	P30533	357 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	AVPR1A	P37288	418 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC11A1	P49279	550 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MYL6	P60660	151 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HPCA	P84074	193 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TAP1	Q03518	808 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	PDK1	Q15118	436 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SLC10A6	Q3KNW5	377 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TEX44	Q53QW1	395 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	BBS5	Q8N3I7	341 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	ZFP42	Q96MM3	310 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HAPLN2	Q9GZV7	340 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	MINDY3	Q9H8M7	445 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	CDHR5	Q9HBB8	845 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	AFF4	Q9UHB7	1163 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	APOBEC2	Q9Y235	224 aa	Known RBP	5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TTLL3	Q9Y4R7	772 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	HEY1	Q9Y5J3	304 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783	TEX264	Q9Y6I9	313 aa		5.78	□□□□□ -1.48
RAPGEF4-215	ENST00000540783		E9PBE3	544 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AIM2	O14862	343 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MCF2L	O15068	1137 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CFLAR	O15519	480 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLHL41	O60662	606 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SIN3B	O75182	1162 aa		5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PENK	P01210	267 aa	Predicted RBP	5.77	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BPGM	P07738	259 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms