RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CDX4O14627 284 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 SLC30A4O14863 429 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 FOXD2O60548 495 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 MFAP3LO75121 409 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 RNASEH2AO75792 299 aaKnown RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 CFIP05156 583 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 IL1R2P27930 398 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 GALCP54803 685 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 AIF1P55008 147 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 TRIM14Q14142 442 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 PUM1Q14671 1186 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 ASTE1Q2TB18 679 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 STPG1Q5TH74 334 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 USP30Q70CQ3 517 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 HDDC3Q8N4P3 179 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 RTL3Q8N8U3 475 aaKnown RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 CHST14Q8NCH0 376 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 OR8K1Q8NGG5 319 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 OR2A12Q8NGT7 310 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 GANCQ8TET4 914 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 OR8D1Q8WZ84 308 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 KCTD15Q96SI1 283 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 CHP1Q99653 195 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 EPAS1Q99814 870 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 PACSIN1Q9BY11 444 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 KLC2Q9H0B6 622 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 RBSNQ9H1K0 784 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 DHX35Q9H5Z1 703 aaKnown RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 CAPN10Q9HC96 672 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 MRPL47Q9HD33 250 aaKnown RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 ABHD10Q9NUJ1 306 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 SCML1Q9UN30 329 aa15.4■□□□□ 0.06
UBE3B-212ENST00000540230 FCF1Q9Y324 198 aaKnown RBP15.4■□□□□ 0.06
UBE3B-212ENST00000540230 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 MCF2LO15068 1137 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 RAMP2O60895 175 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 RNF8O76064 485 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 CYP1A2P05177 515 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 HOXD12P35452 270 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 SERPINH1P50454 418 aaKnown RBP15.39■□□□□ 0.05
UBE3B-212ENST00000540230 LIMK1P53667 647 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 DUOXA1Q1HG43 343 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 ERMARDQ5T6L9 678 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 TXNRD3NBQ6F5E7 133 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 SARM1Q6SZW1 724 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 GAS2L3Q86XJ1 694 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 CPNE8Q86YQ8 564 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 ZCCHC9Q8N567 271 aaKnown RBP15.39■□□□□ 0.05
UBE3B-212ENST00000540230 BIRC7Q96CA5 298 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 OMDQ99983 421 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 MIR1-1HGQ9H1L0 117 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 SGK2Q9HBY8 427 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 EIF2B4Q9UI10 523 aaKnown RBP15.39■□□□□ 0.05
UBE3B-212ENST00000540230 PPM1HQ9ULR3 514 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-212ENST00000540230 PLXNA2O75051 1894 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 CACNA1EQ15878 2313 aa15.39■□□□□ 0.05
UBE3B-212ENST00000540230 WASH4PA8MWX3 477 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 ADH1BP00325 375 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 DESP17661 470 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 ENGP17813 658 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 C5AR1P21730 350 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 CLCN6P51797 869 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 TPI1P60174 286 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 TBX2Q13207 712 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-212ENST00000540230 POLD3Q15054 466 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-212ENST00000540230 SMTNL2Q2TAL5 461 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 KCNT1Q5JUK3 1230 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 WDR45BQ5MNZ6 344 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 SYCP2LQ5T4T6 812 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 NCEH1Q6PIU2 408 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 NETO2Q8NC67 525 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 OR2I1PQ8NGU4 316 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 C1orf216Q8TAB5 229 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 PIP4K2CQ8TBX8 421 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 SNX19Q92543 992 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 ORAI3Q9BRQ5 295 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 RTKNQ9BST9 563 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 NUSAP1Q9BXS6 441 aaKnown RBP15.38■□□□□ 0.05
UBE3B-212ENST00000540230 MAGEH1Q9H213 219 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 RETREG1Q9H6L5 497 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 ANAPC7Q9UJX3 599 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 NCKAP1Q9Y2A7 1128 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 C4orf47A7E2U8 309 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 C10orf142B7Z368 130 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 TM4SF5O14894 197 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 PRPSAP2O60256 369 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 FSBPO95073 299 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 IGHV4-34P06331 123 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 SERPINF2P08697 491 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 GOT1P17174 413 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 DPP6P42658 865 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 MAPK8P45983 427 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 ADPRHP54922 357 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 SLC18A3Q16572 532 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 DPY19L3Q6ZPD9 716 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms