RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 GMNNO75496 209 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 MOCS3O95396 460 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 GUCA1CO95843 209 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 SOX6P35712 828 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 GDI2P50395 445 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 ADAM17P78536 824 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 CCNG2Q16589 344 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 EPC2Q52LR7 807 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 WASHC2DQ5SRD0 308 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 SH2D3CQ8N5H7 860 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 PCYOX1LQ8NBM8 494 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 LMO3Q8TAP4 145 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 DACT3Q96B18 629 aaPredicted RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 OLFM1Q99784 485 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 MTIF3Q9H2K0 278 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 TRNAU1APQ9NX07 287 aaKnown RBP12.84□□□□□ -0.35
DDX55-206ENST00000539934 TBC1D14Q9P2M4 693 aa12.84□□□□□ -0.35
DDX55-206ENST00000539934 TEX51A0A1B0GUA7 166 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 NIPSNAP2O75323 286 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 CXCR2P25025 360 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 LRPAP1P30533 357 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 SOX11P35716 441 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 SLC26A2P50443 739 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 CSNK2BP67870 215 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 TNFAIP2Q03169 654 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 CYP24A1Q07973 514 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 C2orf54Q08AI8 447 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 CAPSQ13938 189 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 LSM12Q3MHD2 195 aaKnown RBP12.83□□□□□ -0.36
DDX55-206ENST00000539934 KCTD21Q4G0X4 260 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 IER5Q5VY09 327 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 KRT39Q6A163 491 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 ZC3H18Q86VM9 953 aaKnown RBP12.83□□□□□ -0.36
DDX55-206ENST00000539934 STX12Q86Y82 276 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 OR6S1Q8NH40 331 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 E2F7Q96AV8 911 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 MFSD14AQ96MC6 490 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 C10orf88Q9H8K7 445 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 USP29Q9HBJ7 922 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 UBE2TQ9NPD8 197 aaPredicted RBP12.83□□□□□ -0.36
DDX55-206ENST00000539934 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
DDX55-206ENST00000539934 PPARGC1AQ9UBK2 798 aaKnown RBP12.83□□□□□ -0.36
DDX55-206ENST00000539934 RBMX2Q9Y388 322 aaKnown RBP12.83□□□□□ -0.36
DDX55-206ENST00000539934 CAPN6Q9Y6Q1 641 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 EVPLQ92817 2033 aa12.83□□□□□ -0.36
DDX55-206ENST00000539934 BUB1O43683 1085 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 LRRN2O75325 713 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 HSD3B2P26439 372 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 LAMC2Q13753 1193 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 SLFN12LQ6IEE8 588 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 BNIPLQ7Z465 357 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 POP1Q99575 1024 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 KATNAL1Q9BW62 490 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 CINPQ9BW66 212 aaPredicted RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 KATNBL1Q9H079 304 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 TMEM8AQ9HCN3 771 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 TBC1D23Q9NUY8 699 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 RPH3AQ9Y2J0 694 aaPredicted RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 PCDHGA2Q9Y5H1 932 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 SAR1BQ9Y6B6 198 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 WDR91A4D1P6 747 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 A8MVJ9 347 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 KIAA0391O15091 583 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 SHOXO15266 292 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 PMM2O15305 246 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 HOXC11O43248 304 aaPredicted RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 JRKO75564 520 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 PIGNO95427 931 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 GH1P01241 217 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 LTA4HP09960 611 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 ESRRAP11474 423 aaPredicted RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 TMEM11P17152 192 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ATP6V1E1P36543 226 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 GPD2P43304 727 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ST13P50502 369 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 COPS2P61201 443 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 AMPD2Q01433 879 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 TPGS2Q68CL5 300 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 TAPT1Q6NXT6 567 aa12.82□□□□□ -0.36
DDX55-206ENST00000539934 ALKBH5Q6P6C2 394 aaKnown RBP12.82□□□□□ -0.36
DDX55-206ENST00000539934 TRAPPC11Q7Z392 1133 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms