RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OR1N1Q8NGS0 311 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 GFM1Q96RP9 751 aaKnown RBP5.48□□□□□ -1.53
CCDC7-209ENST00000539197 PKP4Q99569 1192 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 PRPF18Q99633 342 aaKnown RBP5.48□□□□□ -1.53
CCDC7-209ENST00000539197 TMEM248Q9NWD8 314 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 CDH22Q9UJ99 828 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 CNTN6Q9UQ52 1028 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 MBD3L5A6NJ08 208 aaPredicted RBP5.47□□□□□ -1.53
CCDC7-209ENST00000539197 AQP12BA6NM10 295 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 TMCC1O94876 653 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 HEXIM1O94992 359 aaKnown RBP5.47□□□□□ -1.53
CCDC7-209ENST00000539197 LARGE1O95461 756 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 F7P08709 466 aaPredicted RBP5.47□□□□□ -1.53
CCDC7-209ENST00000539197 TYK2P29597 1187 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 RCAN1P53805 252 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 C5orf22Q49AR2 442 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 IZUMO3Q5VZ72 239 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 ATG9BQ674R7 924 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 MTFR2Q6P444 385 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 MEX3BQ6ZN04 569 aaKnown RBP5.47□□□□□ -1.53
CCDC7-209ENST00000539197 HMGB4Q8WW32 186 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 CERS4Q9HA82 394 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 SDF2L1Q9HCN8 221 aa5.47□□□□□ -1.53
CCDC7-209ENST00000539197 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 FAM90A9PA6NNJ1 464 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 IGLV2-11P01706 119 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 HLA-DQA2P01906 255 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 DAOP14920 347 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 TM4SF4P48230 202 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 CDH12P55289 794 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 MRGPRG-AS1Q2M3A8 158 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 SYTL3Q4VX76 610 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 RETSATQ6NUM9 610 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 DSTYKQ6XUX3 929 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 TMEM163Q8TC26 289 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 MUL1Q969V5 352 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 NODALQ96S42 347 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 STK33Q9BYT3 514 aa5.46□□□□□ -1.54
CCDC7-209ENST00000539197 IGLV5-52A0A0A0MRZ9 124 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-209ENST00000539197 LOC105371045A0A1W2PR82 267 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 HSPB6O14558 160 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 SERPINI2O75830 405 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 CLDN7O95471 211 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 LYL1P12980 280 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 ENO3P13929 434 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-209ENST00000539197 MON1BQ7L1V2 547 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 LILRB1Q8NHL6 650 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-209ENST00000539197 NPAS1Q99742 590 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 SPRY4Q9C004 299 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 TP63Q9H3D4 680 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-209ENST00000539197 DONSONQ9NYP3 566 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 SLC25A13Q9UJS0 675 aa5.45□□□□□ -1.54
CCDC7-209ENST00000539197 C17orf102A2RUQ5 167 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 GRM8O00222 908 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 TNFRSF6BO95407 300 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 SP1P08047 785 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 GYS1P13807 737 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 TRIM27P14373 513 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 EFHC1Q5JVL4 640 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 TRIM74Q86UV6 250 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 TRIM73Q86UV7 250 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 STYXQ8WUJ0 223 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 SLC25A33Q9BSK2 321 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 LIN7CQ9NUP9 197 aaKnown RBP5.44□□□□□ -1.54
CCDC7-209ENST00000539197 RCE1Q9Y256 329 aa5.44□□□□□ -1.54
CCDC7-209ENST00000539197 IGHV4-28A0A0C4DH34 117 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 TMEM247A6NEH6 219 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 DDTLA6NHG4 134 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-209ENST00000539197 ITM2AO43736 263 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 FCGR2AP12318 317 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 ABCB4P21439 1286 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 PRKCHP24723 683 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 C21orf33P30042 268 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-209ENST00000539197 CDK18Q07002 472 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 MYBPC2Q14324 1141 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 ZACNQ401N2 412 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 ZNF771Q7L3S4 317 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-209ENST00000539197 CCAR1Q8IX12 1150 aaKnown RBP5.43□□□□□ -1.54
CCDC7-209ENST00000539197 ZDHHC23Q8IYP9 409 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 SPATA20Q8TB22 786 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 KCNJ9Q92806 393 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 PDE11AQ9HCR9 933 aa5.43□□□□□ -1.54
CCDC7-209ENST00000539197 AGO1Q9UL18 857 aaKnown RBP5.43□□□□□ -1.54
CCDC7-209ENST00000539197 NPIPB13A6NJU9 1138 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 NPIPB5A8MRT5 1133 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 NPIPB4C9JG80 1138 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 EYA2O00167 538 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 BMPR1BO00238 502 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 AFPP02771 609 aaKnown RBP5.42□□□□□ -1.54
CCDC7-209ENST00000539197 PCP4P48539 62 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 DDR1Q08345 913 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms