RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MUC3BQ9H195 1237 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 PABPC3Q9H361 631 aaKnown RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 GPATCH2LQ9NWQ4 482 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 EVLQ9UI08 416 aaPredicted RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 SARDHQ9UL12 918 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 METTL12A8MUP2 240 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 RNF103O00237 685 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 ZBTB24O43167 697 aaPredicted RBP14.01□□□□□ -0.17
CD9-208ENST00000538834 KDELR3O43731 214 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 CTSLP07711 333 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 IL4RP24394 825 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 ACSL1P33121 698 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 SERPINH1P50454 418 aaKnown RBP14.01□□□□□ -0.17
CD9-208ENST00000538834 NDST2P52849 883 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 HADHBP55084 474 aaKnown RBP14.01□□□□□ -0.17
CD9-208ENST00000538834 ZNF33AQ06730 810 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 SERINC3Q13530 473 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 SLC23A3Q6PIS1 610 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 PRR23CQ6ZRP0 262 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 POLNQ7Z5Q5 900 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 SYT12Q8IV01 421 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 AADATQ8N5Z0 425 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 BTBD6Q96KE9 485 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 PANX2Q96RD6 677 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 CATSPERBQ9H7T0 1116 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 VPS45Q9NRW7 570 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 ZNHIT6Q9NWK9 470 aaKnown RBP14.01□□□□□ -0.17
CD9-208ENST00000538834 DLL3Q9NYJ7 618 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 CWC15Q9P013 229 aaKnown RBP14.01□□□□□ -0.17
CD9-208ENST00000538834 SERGEFQ9UGK8 458 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 PCSK1NQ9UHG2 260 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 ANAPC7Q9UJX3 599 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 FZD4Q9ULV1 537 aa14.01□□□□□ -0.17
CD9-208ENST00000538834 MYO1FO00160 1098 aa14□□□□□ -0.17
CD9-208ENST00000538834 TM4SF5O14894 197 aa14□□□□□ -0.17
CD9-208ENST00000538834 PRPSAP2O60256 369 aa14□□□□□ -0.17
CD9-208ENST00000538834 PROSCO94903 275 aa14□□□□□ -0.17
CD9-208ENST00000538834 TPM1P09493 284 aa14□□□□□ -0.17
CD9-208ENST00000538834 RARAP10276 462 aa14□□□□□ -0.17
CD9-208ENST00000538834 DESP17661 470 aa14□□□□□ -0.17
CD9-208ENST00000538834 C5AR1P21730 350 aa14□□□□□ -0.17
CD9-208ENST00000538834 ITPKAP23677 461 aa14□□□□□ -0.17
CD9-208ENST00000538834 SLC8A1P32418 973 aa14□□□□□ -0.17
CD9-208ENST00000538834 MAN1A1P33908 653 aa14□□□□□ -0.17
CD9-208ENST00000538834 DPP6P42658 865 aa14□□□□□ -0.17
CD9-208ENST00000538834 NUMBP49757 651 aa14□□□□□ -0.17
CD9-208ENST00000538834 METAP1P53582 386 aa14□□□□□ -0.17
CD9-208ENST00000538834 LIMK1P53667 647 aa14□□□□□ -0.17
CD9-208ENST00000538834 RPL6Q02878 288 aaKnown RBP14□□□□□ -0.17
CD9-208ENST00000538834 PARP15Q460N3 678 aa14□□□□□ -0.17
CD9-208ENST00000538834 INO80DQ53TQ3 878 aaPredicted RBP14□□□□□ -0.17
CD9-208ENST00000538834 RETSATQ6NUM9 610 aa14□□□□□ -0.17
CD9-208ENST00000538834 RWDD4Q6NW29 188 aaKnown RBP14□□□□□ -0.17
CD9-208ENST00000538834 C22orf39Q6P5X5 142 aa14□□□□□ -0.17
CD9-208ENST00000538834 RFX8Q6ZV50 586 aa14□□□□□ -0.17
CD9-208ENST00000538834 CPNE8Q86YQ8 564 aa14□□□□□ -0.17
CD9-208ENST00000538834 KIAA2013Q8IYS2 634 aa14□□□□□ -0.17
CD9-208ENST00000538834 TMIEQ8NEW7 156 aa14□□□□□ -0.17
CD9-208ENST00000538834 ZNF564Q8TBZ8 553 aaPredicted RBP14□□□□□ -0.17
CD9-208ENST00000538834 CCDC42Q96M95 316 aa14□□□□□ -0.17
CD9-208ENST00000538834 DHX35Q9H5Z1 703 aaKnown RBP14□□□□□ -0.17
CD9-208ENST00000538834 PDFQ9HBH1 243 aa14□□□□□ -0.17
CD9-208ENST00000538834 SGK2Q9HBY8 427 aa14□□□□□ -0.17
CD9-208ENST00000538834 CAPN10Q9HC96 672 aa14□□□□□ -0.17
CD9-208ENST00000538834 ATP13A1Q9HD20 1204 aa14□□□□□ -0.17
CD9-208ENST00000538834 OSGEPQ9NPF4 335 aa14□□□□□ -0.17
CD9-208ENST00000538834 SPTLC3Q9NUV7 552 aa14□□□□□ -0.17
CD9-208ENST00000538834 LCMT1Q9UIC8 334 aa14□□□□□ -0.17
CD9-208ENST00000538834 ACTL7AQ9Y615 435 aa14□□□□□ -0.17
CD9-208ENST00000538834 ZSCAN5CA6NGD5 496 aaPredicted RBP13.99□□□□□ -0.17
CD9-208ENST00000538834 CBX4O00257 560 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 MID1O15344 667 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 CREB3O43889 395 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 AKR1B10O60218 316 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 RAMP2O60895 175 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 ADH1BP00325 375 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 DNTTP04053 509 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 GOT1P17174 413 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 ERCC2P18074 760 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 CDC25BP30305 580 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 DHPSP49366 369 aaPredicted RBP13.99□□□□□ -0.17
CD9-208ENST00000538834 POLD3Q15054 466 aaPredicted RBP13.99□□□□□ -0.17
CD9-208ENST00000538834 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
CD9-208ENST00000538834 LYSMD4Q5XG99 296 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 LINGO4Q6UY18 593 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 Q6ZVU0 165 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 TMEM139Q8IV31 216 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 MMAAQ8IVH4 418 aaKnown RBP13.99□□□□□ -0.17
CD9-208ENST00000538834 CCDC170Q8IYT3 715 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 PCDH20Q8N6Y1 951 aaKnown RBP13.99□□□□□ -0.17
CD9-208ENST00000538834 SLC35G2Q8TBE7 412 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 FOXJ1Q92949 421 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 GPR174Q9BXC1 333 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 NEUROG2Q9H2A3 272 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 RXFP3Q9NSD7 469 aa13.99□□□□□ -0.17
CD9-208ENST00000538834 RCOR3Q9P2K3 495 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms