RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PIWIL2Q8TC59 973 aaKnown RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 VPS39Q96JC1 886 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 C8orf48Q96LL4 319 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 C1orf74Q96LT6 269 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 SORT1Q99523 831 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 TBL1YQ9BQ87 522 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 SIKE1Q9BRV8 207 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 IARS2Q9NSE4 1012 aaKnown RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 TIMM44O43615 452 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 PEX11AO75192 247 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 MPOP05164 745 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 HLA-DQB2P05538 268 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 EZRP15311 586 aaKnown RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 GRK2P25098 689 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ABCG1P45844 678 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 OR1G1P47890 313 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 DLG2Q15700 870 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ZNF683Q8IZ20 524 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ACVR1CQ8NER5 493 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 URGCPQ8TCY9 931 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 GLT1D1Q96MS3 346 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 EBF4Q9BQW3 602 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 NOL6Q9H6R4 1146 aaKnown RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 CAB39LQ9H9S4 337 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 TAS2R1Q9NYW7 299 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 MPP6Q9NZW5 540 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 TLR6Q9Y2C9 796 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 DNAJC16Q9Y2G8 782 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 GREB1Q4ZG55 1949 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 A0A096LPK6 155 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 E2F8A0AVK6 867 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 GOLGA8TH3BQL2 631 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 GSC2O15499 205 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 ANXA9O76027 345 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 MOCS2O96007 188 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-208ENST00000538333 GRK4P32298 578 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 USP46P62068 366 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 TUBB3Q13509 450 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 DDR2Q16832 855 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 PCID2Q5JVF3 399 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 PDPK2PQ6A1A2 396 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 PKN3Q6P5Z2 889 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 RINLQ6ZS11 566 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 CCDC117Q8IWD4 279 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-208ENST00000538333 SLC43A3Q8NBI5 491 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 GPR22Q99680 433 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 DENND2DQ9H6A0 471 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-208ENST00000538333 IL37Q9NZH6 218 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 SRRDQ9UH36 339 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 MRPL42Q9Y6G3 142 aaKnown RBP14.25□□□□□ -0.13
LIMK1-208ENST00000538333 MIA3Q5JRA6 1907 aa14.25□□□□□ -0.13
LIMK1-208ENST00000538333 C2P06681 752 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 SERPINA6P08185 405 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 ESRRAP11474 423 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 CPA3P15088 417 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 HARS2P49590 506 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 CDK7P50613 346 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 PAPOLAP51003 745 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 IRF9Q00978 393 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 ACCSLQ4AC99 568 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 WASHC2DQ5SRD0 308 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 VARS2Q5ST30 1063 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 TIGD7Q6NT04 549 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 ZC3HC1Q86WB0 502 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 LRRC49Q8IUZ0 686 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 WDR75Q8IWA0 830 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 CNTN4Q8IWV2 1026 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 IPMKQ8NFU5 416 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 CCDC106Q9BWC9 280 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 FBXO44Q9H4M3 255 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 FNIP2Q9P278 1114 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 PPARGC1AQ9UBK2 798 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 FAM92AA1XBS5 289 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 G3V2L1 256 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 SYN3O14994 580 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 ANP32DO95626 131 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 PEX11BO96011 259 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 RALBP11234 206 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 ARNTP27540 789 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 GABRB3P28472 473 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 MAGEA11P43364 429 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 GEMP55040 296 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 MRPL58Q14197 206 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 MAVSQ7Z434 540 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 TTC9BQ8N6N2 239 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 FICDQ9BVA6 458 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 RHOJQ9H4E5 214 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 STN1Q9H668 368 aaKnown RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 RNPEPL1Q9HAU8 725 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 PRDM5Q9NQX1 630 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 RBM22Q9NW64 420 aaKnown RBP eCLIP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
LIMK1-208ENST00000538333 NKX1-2Q9UD57 310 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-208ENST00000538333 CCDC78A2IDD5 438 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms