RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 NODALQ96S42 347 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 STK33Q9BYT3 514 aa5.46□□□□□ -1.54
CCDC7-208ENST00000537047 IGLV5-52A0A0A0MRZ9 124 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 LOC105371045A0A1W2PR82 267 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 HSPB6O14558 160 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 ASAP2O43150 1006 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 TMCC1O94876 653 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 CLDN7O95471 211 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 IGLV2-11P01706 119 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 LYL1P12980 280 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 NAGAP17050 411 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 HOXB9P17482 250 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-208ENST00000537047 CDH12P55289 794 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 HLFQ16534 295 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 VWA5B1Q5TIE3 1220 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 LILRB1Q8NHL6 650 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-208ENST00000537047 SPRY4Q9C004 299 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 TP63Q9H3D4 680 aaPredicted RBP5.45□□□□□ -1.54
CCDC7-208ENST00000537047 DONSONQ9NYP3 566 aa5.45□□□□□ -1.54
CCDC7-208ENST00000537047 MBD3L5A6NJ08 208 aaPredicted RBP5.44□□□□□ -1.54
CCDC7-208ENST00000537047 GRM8O00222 908 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 BUB3O43684 328 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 TNFRSF6BO95407 300 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 GYS1P13807 737 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 TRIM27P14373 513 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 TUBA1BP68363 451 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 C5orf22Q49AR2 442 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 WBP2NLQ6ICG8 309 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 TRIM74Q86UV6 250 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 TRIM73Q86UV7 250 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 ENDOVQ8N8Q3 282 aaKnown RBP5.44□□□□□ -1.54
CCDC7-208ENST00000537047 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 STYXQ8WUJ0 223 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 SLC35F5Q8WV83 523 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 WBP1Q96G27 269 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 IGSF21Q96ID5 467 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 TCF7L2Q9NQB0 619 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 SLC25A13Q9UJS0 675 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 NFU1Q9UMS0 254 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 RCE1Q9Y256 329 aa5.44□□□□□ -1.54
CCDC7-208ENST00000537047 DDTLA6NHG4 134 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-208ENST00000537047 LARGE1O95461 756 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 FCGR2AP12318 317 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 ABCB4P21439 1286 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 CDK18Q07002 472 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 TRAF2Q12933 501 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 MYBPC2Q14324 1141 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 ZNF771Q7L3S4 317 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-208ENST00000537047 CCAR1Q8IX12 1150 aaKnown RBP5.43□□□□□ -1.54
CCDC7-208ENST00000537047 SPATA20Q8TB22 786 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 KCNJ9Q92806 393 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 PDE11AQ9HCR9 933 aa5.43□□□□□ -1.54
CCDC7-208ENST00000537047 NPIPB13A6NJU9 1138 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 NPIPB5A8MRT5 1133 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 NPIPB4C9JG80 1138 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 AFPP02771 609 aaKnown RBP5.42□□□□□ -1.54
CCDC7-208ENST00000537047 ILF3Q12906 894 aaKnown RBP eCLIP5.42□□□□□ -1.54
CCDC7-208ENST00000537047 SF3B4Q15427 424 aaKnown RBP eCLIP5.42□□□□□ -1.54
CCDC7-208ENST00000537047 ZRSR1Q15695 479 aaKnown RBP5.42□□□□□ -1.54
CCDC7-208ENST00000537047 TCP11L2Q8N4U5 519 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 DUX5Q96PT3 197 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 GFM1Q96RP9 751 aaKnown RBP5.42□□□□□ -1.54
CCDC7-208ENST00000537047 LHPPQ9H008 270 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 LIN7CQ9NUP9 197 aaKnown RBP5.42□□□□□ -1.54
CCDC7-208ENST00000537047 IL36RNQ9UBH0 155 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 KIF26BQ2KJY2 2108 aa5.42□□□□□ -1.54
CCDC7-208ENST00000537047 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 ITM2AO43736 263 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 PRKCHP24723 683 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 MRGPRG-AS1Q2M3A8 158 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 TRIM60Q495X7 471 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 MON1BQ7L1V2 547 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 PALB2Q86YC2 1186 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 RFLNBQ8N5W9 214 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 ZNF333Q96JL9 665 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 CCDC138Q96M89 665 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 NPAS1Q99742 590 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 SLC25A33Q9BSK2 321 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 TRIM31Q9BZY9 425 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 GAREM1Q9H706 876 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 ACAD9Q9H845 621 aa5.41□□□□□ -1.54
CCDC7-208ENST00000537047 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
CCDC7-208ENST00000537047 IGHV4-28A0A0C4DH34 117 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 PRR23AA6NEV1 266 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 CGAP01215 116 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 SP1P08047 785 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 CYP21A2P08686 494 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 CTTNQ14247 550 aaKnown RBP5.4□□□□□ -1.54
CCDC7-208ENST00000537047 GPT2Q8TD30 523 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 FAR1Q8WVX9 515 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 SLC22A11Q9NSA0 550 aa5.4□□□□□ -1.54
CCDC7-208ENST00000537047 WDR81Q562E7 1941 aa5.4□□□□□ -1.55
CCDC7-208ENST00000537047 MST1RQ04912 1400 aa5.4□□□□□ -1.55
CCDC7-208ENST00000537047 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
CCDC7-208ENST00000537047 BMPR1BO00238 502 aa5.39□□□□□ -1.55
CCDC7-208ENST00000537047 KRT36O76013 467 aa5.39□□□□□ -1.55
CCDC7-208ENST00000537047 DDAH2O95865 285 aa5.39□□□□□ -1.55
CCDC7-208ENST00000537047 F7P08709 466 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms