RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ATP11CQ8NB49 1132 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RAPGEF5Q92565 580 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 FAF2Q96CS3 445 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SIPA1Q96FS4 1042 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RSPH9Q9H1X1 276 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PRDM16Q9HAZ2 1276 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PDFQ9HBH1 243 aa11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LUC7LQ9NQ29 371 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 USP36Q9P275 1121 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ANKRD36A6QL64 1941 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 IGHV1OR15-9A0A0B4J2B8 117 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 J3KR12 359 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RNF103O00237 685 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KRT7P08729 469 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PLA2G5P39877 138 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NNMTP40261 264 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SLC1A1P43005 524 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MARCKSL1P49006 195 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PAPOLAP51003 745 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TPMTP51580 245 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CLCN6P51797 869 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NDST2P52849 883 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 METAP1P53582 386 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SIM2Q14190 667 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KRT81Q14533 505 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LPAL2Q16609 132 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PLK5Q496M5 336 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ACCSLQ4AC99 568 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 USP39Q53GS9 565 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZNF776Q68DI1 518 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RETSATQ6NUM9 610 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 C11orf63Q6NUN7 778 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 C22orf39Q6P5X5 142 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KIAA1328Q86T90 577 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KCTD6Q8NC69 237 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 OR2A12Q8NGT7 310 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PCDH19Q8TAB3 1148 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PRCCQ92733 491 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 VOPP1Q96AW1 172 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZNF670Q9BS34 389 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TNKS2Q9H2K2 1166 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 FBRSQ9HAH7 460 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RCOR3Q9P2K3 495 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SERGEFQ9UGK8 458 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CYP8B1Q9UNU6 501 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 FCF1Q9Y324 198 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RALGAPA1Q6GYQ0 2036 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CXorf51AA0A1B0GTR3 108 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 GRID2IPA4D2P6 1211 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PRR23AA6NEV1 266 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ARHGAP6O43182 974 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SPOPO43791 374 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 IGLV3-19P01714 112 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CTSLP07711 333 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TNNT1P13805 278 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KDELR1P24390 212 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MRE11P49959 708 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ELAVL3Q14576 367 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PDK2Q15119 407 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CST6Q15828 149 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ANKRD20A8PQ5CZ79 823 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LRRC38Q5VT99 294 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NCBP2-AS2Q69YL0 99 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TMCO3Q6UWJ1 677 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PRR23BQ6ZRT6 265 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CEP68Q76N32 757 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZNF354CQ86Y25 554 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MMAAQ8IVH4 418 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PQLC3Q8N755 202 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LRRC57Q8N9N7 239 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CHST14Q8NCH0 376 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CCDC112Q8NEF3 446 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 NKD2Q969F2 451 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZC3H10Q96K80 434 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CALN1Q9BXU9 219 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DUSP15Q9H1R2 295 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SEMA4AQ9H3S1 761 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ITM2CQ9NQX7 267 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SARDHQ9UL12 918 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 HPCAL4Q9UM19 191 aa11.54□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MACROD2A1Z1Q3 448 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ARHGAP42A6NI28 874 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DFFAO00273 331 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MCF2LO15068 1137 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MID1O15344 667 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 MFSD11O43934 449 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 BNIP3LO60238 219 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PRAMEF11O60813 436 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 ZNF217O75362 1048 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TMCC1O94876 653 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LMNAP02545 664 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KRT1P04264 644 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DRD3P35462 400 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PSMD8P48556 350 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SLC20A2Q08357 652 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms