RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ARSAP15289 507 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TGM2P21980 687 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 HOXD9P28356 352 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 GDI1P31150 447 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 NR2C2P49116 596 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 NDST2P52849 883 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ELF3P78545 371 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 GAD2Q05329 585 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 GRM2Q14416 872 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 AFMIDQ63HM1 303 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 KAZNQ674X7 775 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TPGS1Q6ZTW0 290 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ADHFE1Q8IWW8 467 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 SLC44A3Q8N4M1 653 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 GBP7Q8N8V2 638 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF557Q8N988 423 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ATXN2LQ8WWM7 1075 aaKnown RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ZFYVE19Q96K21 471 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 UTP11Q9Y3A2 253 aaKnown RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 SPTBN5Q9NRC6 3674 aaKnown RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 DOCK4Q8N1I0 1966 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TCRBV7S2A1N4TA0A589 114 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 APOC4-APOC2K7ER74 178 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 LUC7L3O95232 432 aaKnown RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 APOC2P02655 101 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 SERPINB6P35237 376 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 OXCT1P55809 520 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 YBEYP58557 167 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 NR1H3Q13133 447 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF177Q13360 481 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 RUNX3Q13761 415 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 LLGL1Q15334 1064 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 SIX1Q15475 284 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF783Q6ZMS7 281 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 CIR1Q86X95 450 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 KLHL7Q8IXQ5 586 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 CPA6Q8N4T0 437 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 FIBINQ8TAL6 211 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 UBLCP1Q8WVY7 318 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 BBS2Q9BXC9 721 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 FRMD8P1Q9BZ68 369 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 TXLNGYQ9BZA5 131 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ECT2Q9H8V3 914 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 NDFIP2Q9NV92 336 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 NOVA2Q9UNW9 492 aaKnown RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 CCDC189A1A4V9 331 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 ILVBLA1L0T0 632 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 ADH5P11766 374 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 TYRP14679 529 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 OR1E1P30953 314 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 DRG2P55039 364 aaKnown RBP12.57□□□□□ -0.4
SCARB1-204ENST00000535005 ZP2Q05996 745 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 QPCTQ16769 361 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 GAB4Q2WGN9 574 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 KRT71Q3SY84 523 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 C6orf118Q5T5N4 469 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 CXorf57Q6NSI4 855 aaKnown RBP12.57□□□□□ -0.4
SCARB1-204ENST00000535005 BZW1Q7L1Q6 419 aaKnown RBP12.57□□□□□ -0.4
SCARB1-204ENST00000535005 TFAP2DQ7Z6R9 452 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 PIGWQ7Z7B1 504 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 CCDC63Q8NA47 563 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 LRRC19Q9H756 370 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 BRD9Q9H8M2 597 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 NOD2Q9HC29 1040 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 DTLQ9NZJ0 730 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 MFHAS1Q9Y4C4 1052 aa12.57□□□□□ -0.4
SCARB1-204ENST00000535005 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 NEDD8-MDP1E9PL57 170 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 KRIT1O00522 736 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 CACNG3O60359 315 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 ALADP13716 330 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 MAGOHP61326 146 aaKnown RBP12.56□□□□□ -0.4
SCARB1-204ENST00000535005 DYNLT1P63172 113 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 GBE1Q04446 702 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 TNK2Q07912 1038 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 SLC10A2Q12908 348 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-204ENST00000535005 SLC12A1Q13621 1099 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 ANO4Q32M45 955 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 LRRC49Q8IUZ0 686 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 CCDC117Q8IWD4 279 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-204ENST00000535005 ARHGAP12Q8IWW6 846 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 CARNMT1Q8N4J0 409 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 NPWQ8N729 165 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
SCARB1-204ENST00000535005 LMLNQ96KR4 655 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 OLFM3Q96PB7 478 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF317Q96PQ6 595 aaPredicted RBP12.56□□□□□ -0.4
SCARB1-204ENST00000535005 MAGEH1Q9H213 219 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms