RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 KRT10P13645 584 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 VAV1P15498 845 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 GOT1P17174 413 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 C5AR1P21730 350 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC8A1P32418 973 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 DRD3P35462 400 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 CSRP3P50461 194 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 CDH4P55283 916 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 TMPRSS3P57727 454 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 CENPCQ03188 943 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 SFSWAPQ12872 951 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 NME3Q13232 169 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 RAPGEF1Q13905 1077 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 ELAVL3Q14576 367 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 TBC1D25Q3MII6 688 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 SLC25A52Q3SY17 297 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 NCEH1Q6PIU2 408 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 NOP9Q86U38 636 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 ERICH1Q86X53 443 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 OR2T34Q8NGX1 318 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 GPT2Q8TD30 523 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 EPS8L1Q8TE68 723 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 RNF34Q969K3 372 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 RPRD1AQ96P16 312 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 PPP1R9BQ96SB3 815 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 PSMB7Q99436 277 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 TKTL2Q9H0I9 626 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 WDCPQ9H6R7 721 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 COX16Q9P0S2 106 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 ZNF212Q9UDV6 495 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 VANGL2Q9ULK5 521 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 CEP83Q9Y592 693 aa10.34□□□□□ -0.75
CLSTN3-203ENST00000534830 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ARID1BQ8NFD5 2236 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 CNTN5O94779 1100 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ENDOD1O94919 500 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 FSBPO95073 299 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 LSM8O95777 96 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ADH1BP00325 375 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 F9P00740 461 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 WNT1P04628 370 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 MMEP08473 750 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 C1SP09871 688 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 NNMTP40261 264 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 CTSKP43235 329 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 CCR5P51681 352 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ADPRHP54922 357 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 JAM2P57087 298 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 RACK1P63244 317 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 NOMO3P69849 1222 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ZNF177Q13360 481 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 KRT31Q15323 416 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ALFQ53S48 1182 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 PRAMEF14Q5SWL7 426 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ACBD5Q5T8D3 534 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 SND1Q7KZF4 910 aaKnown RBP eCLIP10.33□□□□□ -0.761e-8■■■■□ 21.7
CLSTN3-203ENST00000534830 ZNF677Q86XU0 584 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 SH2D3CQ8N5H7 860 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ZNF248Q8NDW4 579 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 SPAG5Q96R06 1193 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 TBCBQ99426 244 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 TRIM4Q9C037 500 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 ARHGAP20Q9P2F6 1191 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 NOCTQ9UK39 431 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 SARDHQ9UL12 918 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 STAP1Q9ULZ2 295 aa10.33□□□□□ -0.76
CLSTN3-203ENST00000534830 A0A1W2PR77 199 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 LRRC10BA6NIK2 292 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 LRRC72A6NJI9 287 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 MCF2LO15068 1137 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 VILLO15195 856 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 EPHB6O15197 1021 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 ALOX15BO15296 676 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 LATO43561 262 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 DFNA5O60443 496 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 RNASEH2AO75792 299 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 ITGAVP06756 1048 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 CHRNB2P17787 502 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 FLT3P36888 993 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 GGCXP38435 758 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 PSMD8P48556 350 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 ACADVLP49748 655 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 NUMBP49757 651 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 KLK7P49862 253 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 SULT1E1P49888 294 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 METAP1P53582 386 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 UCNP55089 124 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 C21orf59P57076 290 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 RNASE9P60153 205 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 FMO1Q01740 532 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 DEUP1Q05D60 604 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 DLG2Q15700 870 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 C2CD6Q53TS8 623 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 FAM102AQ5T9C2 384 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 TAF3Q5VWG9 929 aa10.32□□□□□ -0.76
CLSTN3-203ENST00000534830 RNF219Q5W0B1 726 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms