RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KLKB1P03952 638 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 VDRP11473 427 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 SFTPCP11686 197 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 BRD2P25440 801 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 ARHGAP25P42331 645 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 PSEN1P49768 467 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 CCR5P51681 352 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 VAV2P52735 878 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 GALCP54803 685 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 INHBCP55103 352 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 DAB2P98082 770 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 UBAP2LQ14157 1087 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 CLEC16AQ2KHT3 1053 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 NCEH1Q6PIU2 408 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 KANSL1Q7Z3B3 1105 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 DNAAF5Q86Y56 855 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF276Q8N554 614 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 EXD3Q8N9H8 876 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 OR2T34Q8NGX1 318 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 WFIKKN2Q8TEU8 576 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 DDI1Q8WTU0 396 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 CYFIP2Q96F07 1278 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 SERAC1Q96JX3 654 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 CDK5RAP1Q96SZ6 601 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 LACRTQ9GZZ8 138 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 PABPC3Q9H361 631 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 CSNK1G1Q9HCP0 422 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 LUC7LQ9NQ29 371 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 LZTFL1Q9NQ48 299 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 STARD5Q9NSY2 213 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 FBXL12Q9NXK8 326 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 UNC79Q9P2D8 2635 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 FAM170AA1A519 330 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 GOLGA6L9A6NEM1 432 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 MDM4O15151 490 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 PJA2O43164 708 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 MED7O43513 233 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 SIGLEC6O43699 453 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 OPA1O60313 960 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 MAGEC1O60732 1142 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 RNASEH1O60930 286 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 RTN2O75298 545 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CSO75390 466 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 FTLP02792 175 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CYP1A1P04798 512 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 H2AFZP0C0S5 128 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 RALAP11233 206 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 GZMAP12544 262 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CORO1AP31146 461 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 MAP3K7CLP57077 242 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 KIF5AQ12840 1032 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CNGA2Q16280 664 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ACAD10Q6JQN1 1059 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 TRIM72Q6ZMU5 477 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF662Q6ZS27 426 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 H2AFVQ71UI9 128 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ACOT1Q86TX2 421 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CRYBG2Q8N1P7 616 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF366Q8N895 744 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZMIZ2Q8NF64 920 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CYB5D2Q8WUJ1 264 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 SMOQ99835 787 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ARHGAP9Q9BRR9 750 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 PACSIN1Q9BY11 444 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 ISCUQ9H1K1 167 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 RSPH9Q9H1X1 276 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 EBF2Q9HAK2 575 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 NUDT5Q9UKK9 219 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 TP53BP1Q12888 1972 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-213ENST00000533149 PLXNA2O75051 1894 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 A0A1W2PQH9 124 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 BEST1O76090 585 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 ATP5BP06576 529 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 UNGP13051 313 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 SKOR1P84550 965 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 OVGP1Q12889 678 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 MPPE1Q53F39 396 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 NAA35Q5VZE5 725 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 DENND1BQ6P3S1 775 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 DENND1CQ8IV53 801 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 TXLNBQ8N3L3 684 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 C12orf29Q8N999 325 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 MFSD2AQ8NA29 543 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 CPA5Q8WXQ8 436 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 GRAMD1AQ96CP6 724 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 SLC46A1Q96NT5 459 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 DNAI2Q9GZS0 605 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 ABCG4Q9H172 646 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 NMUR1Q9HB89 426 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 TRIM10Q9UDY6 481 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 AGO1Q9UL18 857 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 INTUQ9ULD6 942 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 FZD4Q9ULV1 537 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms