RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PPM1BO75688 479 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 SMNDC1O75940 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 EGFP01133 1207 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 KLKB1P03952 638 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 HRGP04196 525 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 ERBB2P04626 1255 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 PTMAP06454 111 aaKnown RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 EPHX1P07099 455 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 MMEP08473 750 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CCDC172P0C7W6 258 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CDH5P33151 784 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CHKAP35790 457 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 OPRD1P41143 372 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CXCL12P48061 93 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CDR2Q01850 454 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 MTAPQ13126 283 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 GALEQ14376 348 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 PPP2R5DQ14738 602 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NR1I3Q14994 352 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 TAF5Q15542 800 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 GAB4Q2WGN9 574 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 FBXO43Q4G163 708 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 PTPN20Q4JDL3 420 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 EFHC1Q5JVL4 640 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NAA35Q5VZE5 725 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NAIF1Q69YI7 327 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 OR6B2Q6IFH4 312 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 MSANTD2Q6P1R3 559 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 Q6ZNB5 142 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 RIPOR1Q6ZS17 1223 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 Q6ZS52 159 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 TPGS1Q6ZTW0 290 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 BEND5Q7L4P6 421 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 RASSF3Q86WH2 238 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 ERICH1Q86X53 443 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 ZNF677Q86XU0 584 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 TMEM25Q86YD3 366 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 ZDHHC17Q8IUH5 632 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 DENND1CQ8IV53 801 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 SPEM1Q8N4L4 309 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NAT16Q8N8M0 369 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 MSANTD4Q8NCY6 345 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 BVESQ8NE79 360 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CCDC26Q8TAB7 109 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 SLC35G2Q8TBE7 412 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 STK35Q8TDR2 534 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 DQX1Q8TE96 717 aaKnown RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 SLC20A1Q8WUM9 679 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 BTN2A2Q8WVV5 523 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 ATOH1Q92858 354 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 BHMTQ93088 406 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CCDC138Q96M89 665 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 CCDC140Q96MF4 163 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 PPM1MQ96MI6 270 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NSUN5Q96P11 429 aaKnown RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 SERPINB11Q96P15 392 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 PNKPQ96T60 521 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 BBS2Q9BXC9 721 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 TSPY26PQ9H489 355 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 ASNSD1Q9NWL6 643 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 MARK1Q9P0L2 795 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 SAMD15Q9P1V8 674 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 WDR35Q9P2L0 1181 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 TJP2Q9UDY2 1190 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 KLHL3Q9UH77 587 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NOCTQ9UK39 431 aaKnown RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 AGO1Q9UL18 857 aaKnown RBP5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 NAALADL1Q9UQQ1 740 aa5.99□□□□□ -1.45
HMGB1P42-201ENST00000532126 GREB1Q4ZG55 1949 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 PATJQ8NI35 1801 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 FAM170AA1A519 330 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 TBC1D3BA6NDS4 549 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 J3KRW8 73 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 SNX2O60749 519 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 HSF2BPO75031 334 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 ATG13O75143 517 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 TULP3O75386 442 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 GRAP2O75791 330 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 KAT7O95251 611 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 LATS1O95835 1130 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 IGLV3-27P01718 113 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 CYBBP04839 570 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 APODP05090 189 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 FYNP06241 537 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 TPM3P06753 285 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 GLI1P08151 1106 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 GSTP1P09211 210 aaKnown RBP5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 TYRP14679 529 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 FERP16591 822 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 CHRNB2P17787 502 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 TNFAIP3P21580 790 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 GBP1P32455 592 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 EIF2DP41214 584 aaKnown RBP5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 GRIA2P42262 883 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 MAPK9P45984 424 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 SLC6A11P48066 632 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 SLC11A2P49281 568 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 CCR3P51677 355 aa5.98□□□□□ -1.45
HMGB1P42-201ENST00000532126 UBASH3AP57075 661 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms