RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 AASDHPPTQ9NRN7 309 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 TMEM247A6NEH6 219 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 C3orf70A6NLC5 250 aaPredicted RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 NT5C1B-RDH14C9J2C7 533 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 CAPN1P07384 714 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 CPB1P15086 417 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 EDNRBP24530 442 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 MAXP61244 160 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 SREBF2Q12772 1141 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 TAPT1Q6NXT6 567 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 CYP2R1Q6VVX0 501 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 ACAD11Q709F0 780 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PCDH20Q8N6Y1 951 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 CSPG4P5Q96PW8 444 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 EBNA1BP2Q99848 306 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PAAF1Q9BRP4 392 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 SFMBT1Q9UHJ3 866 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 TAGLN3Q9UI15 199 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PSAT1Q9Y617 370 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 NCF1BA6NI72 391 aaPredicted RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 NCF1CA8MVU1 366 aaPredicted RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PMM2O15305 246 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PEX11AO75192 247 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 NCF1P14598 390 aaPredicted RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 DARSP14868 501 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 ERCC2P18074 760 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 CYP3A5P20815 502 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 CCR10P46092 362 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 MRPS22P82650 360 aaKnown RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 SNX32Q86XE0 403 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
LTBP3-218ENST00000530866 SH3GL1Q99961 368 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 ACTL7BQ9Y614 415 aa12.91□□□□□ -0.34
LTBP3-218ENST00000530866 BEST1O76090 585 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 PBX3P40426 434 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 CPT1AP50416 773 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-218ENST00000530866 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 ITPRIPL1Q6GPH6 555 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 LRRC8EQ6NSJ5 796 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 LDB1Q86U70 411 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-218ENST00000530866 HPS6Q86YV9 775 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 KCTD15Q96SI1 283 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-218ENST00000530866 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-218ENST00000530866 SEMA6AQ9H2E6 1030 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 LRMDAQ9H2I8 198 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
LTBP3-218ENST00000530866 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 CARD8Q9Y2G2 431 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 NUP205Q92621 2012 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 PRPF4O43172 522 aaKnown RBP eCLIP12.9□□□□□ -0.344e-7■■■□□ 16.9
LTBP3-218ENST00000530866 TBX10O75333 385 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 SPAG6O75602 509 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 SPATA22Q8NHS9 363 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 B3GALT6Q96L58 329 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 ADAM2Q99965 735 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 FICDQ9BVA6 458 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 TKTL2Q9H0I9 626 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 TMEM216Q9P0N5 145 aa12.9□□□□□ -0.34
LTBP3-218ENST00000530866 AMHP03971 560 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 ALADP13716 330 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 HNRNPLP14866 589 aaKnown RBP eCLIP12.9□□□□□ -0.351e-12■■■■□ 22.2
LTBP3-218ENST00000530866 NFKB1P19838 968 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 SERPINB9P50453 376 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 ATN1P54259 1190 aaPredicted RBP12.9□□□□□ -0.35
LTBP3-218ENST00000530866 HDAC4P56524 1084 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 LILRA4P59901 499 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 RAVER1Q8IY67 606 aaKnown RBP12.9□□□□□ -0.35
LTBP3-218ENST00000530866 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 OMA1Q96E52 524 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 CEP44Q9C0F1 390 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 CCDC68Q9H2F9 335 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 LIN28AQ9H9Z2 209 aaKnown RBP12.9□□□□□ -0.35
LTBP3-218ENST00000530866 KCNH4Q9UQ05 1017 aa12.9□□□□□ -0.35
LTBP3-218ENST00000530866 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 GLRA3O75311 464 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 WASHC2DQ5SRD0 308 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 TDRD5Q8NAT2 981 aaKnown RBP12.89□□□□□ -0.35
LTBP3-218ENST00000530866 PIWIL2Q8TC59 973 aaKnown RBP12.89□□□□□ -0.35
LTBP3-218ENST00000530866 PCDHGC3Q9UN70 934 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 PLLPQ9Y342 182 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 MDM4O15151 490 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 GRM5P41594 1212 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 CSE1LP55060 971 aaKnown RBP12.89□□□□□ -0.35
LTBP3-218ENST00000530866 STILQ15468 1287 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 FSCBQ5H9T9 825 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
LTBP3-218ENST00000530866 RPS27LQ71UM5 84 aaKnown RBP12.89□□□□□ -0.35
LTBP3-218ENST00000530866 LPCAT2Q7L5N7 544 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms