RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 KCNK12Q9HB15 430 aa14.72□□□□□ -0.05
TTC39A-216ENST00000530004 TMEM248Q9NWD8 314 aa14.72□□□□□ -0.05
TTC39A-216ENST00000530004 DONSONQ9NYP3 566 aa14.72□□□□□ -0.05
TTC39A-216ENST00000530004 NINJ2Q9NZG7 142 aa14.72□□□□□ -0.05
TTC39A-216ENST00000530004 IGSF9Q9P2J2 1179 aa14.72□□□□□ -0.05
TTC39A-216ENST00000530004 MTSS1O43312 755 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 OPA1O60313 960 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 ACSL3O95573 720 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 NUDT17P0C025 328 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 PTPN3P26045 913 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 MAGEA6P43360 314 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 ZP2Q05996 745 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 ZNF33AQ06730 810 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 CEP85LQ5SZL2 805 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 RFWD3Q6PCD5 774 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 ARHGAP36Q6ZRI8 547 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 CIR1Q86X95 450 aaPredicted RBP14.71□□□□□ -0.05
TTC39A-216ENST00000530004 ADGRG2Q8IZP9 1017 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 LGI2Q8N0V4 545 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 CPXM2Q8N436 756 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 GOLGA6L1Q8N7Z2 621 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 EXOC4Q96A65 974 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 MYEOVQ96EZ4 313 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 ZFYVE19Q96K21 471 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 C9orf72Q96LT7 481 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 TSGA13Q96PP4 275 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 DDX50Q9BQ39 737 aaKnown RBP14.71□□□□□ -0.05
TTC39A-216ENST00000530004 FAM83CQ9BQN1 747 aa14.71□□□□□ -0.05
TTC39A-216ENST00000530004 TRMT61BQ9BVS5 477 aaKnown RBP14.71□□□□□ -0.05
TTC39A-216ENST00000530004 DUS2Q9NX74 493 aaKnown RBP14.71□□□□□ -0.05
TTC39A-216ENST00000530004 KLHL8Q9P2G9 620 aaPredicted RBP14.71□□□□□ -0.05
TTC39A-216ENST00000530004 HELZP42694 1942 aaKnown RBP14.71□□□□□ -0.06
TTC39A-216ENST00000530004 E7EVH7 732 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 F5H423 210 aaPredicted RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 GFRA2O00451 464 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 TTC4O95801 387 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 SHBGP04278 402 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 CCNCP24863 283 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 FDFT1P37268 417 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 IFNAR2P48551 515 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 IFFO1Q0D2I5 559 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PDIA2Q13087 525 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 SEMA5AQ13591 1074 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 FASTKD3Q14CZ7 662 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 KYNUQ16719 465 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 EML3Q32P44 896 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 FNBP1LQ5T0N5 605 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 TRIM68Q6AZZ1 485 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PID1Q7Z2X4 250 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 YAF2Q8IY57 180 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 ZBED8Q8IZ13 594 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 UMODL1-AS1Q8N2C9 162 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 UHMK1Q8TAS1 419 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 ASB2Q96Q27 587 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PHACTR1Q9C0D0 580 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 NOL6Q9H6R4 1146 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 TRDMT1O14717 391 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 MAFKO60675 156 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 BANF1O75531 89 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 ASGR2P07307 311 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 BMP1P13497 986 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PSMB4P28070 264 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PAPOLAP51003 745 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 NDST2P52849 883 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 EIF3BP55884 814 aaKnown RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 ZNF844Q08AG5 666 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 ZBTB17Q13105 803 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PARP6Q2NL67 630 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 MSS51Q4VC12 460 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 HP1BP3Q5SSJ5 553 aaPredicted RBP14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PPP1R21Q6ZMI0 780 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 PDIK1LQ8N165 341 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 CFAP52Q8N1V2 620 aa14.7□□□□□ -0.06
TTC39A-216ENST00000530004 UNC80Q8N2C7 3258 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 ALOX15BO15296 676 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 EIF3HO15372 352 aaKnown RBP eCLIP14.69□□□□□ -0.06
TTC39A-216ENST00000530004 ZBTB24O43167 697 aaPredicted RBP14.69□□□□□ -0.06
TTC39A-216ENST00000530004 JCHAINP01591 159 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 TPSB2P20231 275 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 GDI1P31150 447 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 LMAN1P49257 510 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 MTM1Q13496 603 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 PDGFRLQ15198 375 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 TPSAB1Q15661 275 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 C5orf22Q49AR2 442 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 TEX44Q53QW1 395 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 TPGS1Q6ZTW0 290 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 LRRC49Q8IUZ0 686 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 SLC44A3Q8N4M1 653 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 TMA16Q96EY4 203 aaKnown RBP14.69□□□□□ -0.06
TTC39A-216ENST00000530004 PRICKLE1Q96MT3 831 aaPredicted RBP14.69□□□□□ -0.06
TTC39A-216ENST00000530004 AGAP3Q96P47 875 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 SERPINB12Q96P63 405 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 VAT1Q99536 393 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 EBF3Q9H4W6 596 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 SPHK2Q9NRA0 654 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 ZNF212Q9UDV6 495 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 TRHDEQ9UKU6 1024 aa14.69□□□□□ -0.06
TTC39A-216ENST00000530004 GOLGA6L10A6NI86 522 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms