RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 Q6ZVU0 165 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 TFAP2DQ7Z6R9 452 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 TRIM69Q86WT6 500 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 MCOLN2Q8IZK6 566 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 OR2A12Q8NGT7 310 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 BAHD1Q8TBE0 780 aaPredicted RBP12.34□□□□□ -0.43
COPB1-206ENST00000529210 GANCQ8TET4 914 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 CCDC114Q96M63 670 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 CNTNAP3BQ96NU0 1288 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 CNTNAP3Q9BZ76 1288 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 RAB6CQ9H0N0 254 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 GAREM1Q9H706 876 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 EBF2Q9HAK2 575 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 TMEM248Q9NWD8 314 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
COPB1-206ENST00000529210 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
COPB1-206ENST00000529210 TP53BP1Q12888 1972 aaPredicted RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 A0A1B0GVT2 93 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 ZNF821O75541 412 aaPredicted RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 LRIG2O94898 1065 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 TRIM16O95361 564 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 GJB6O95452 261 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 GZMAP12544 262 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 L1CAMP32004 1257 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 SERPINH1P50454 418 aaKnown RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 NR1I3Q14994 352 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 CDO1Q16878 200 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 KIF19Q2TAC6 998 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 ACCSLQ4AC99 568 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 RETSATQ6NUM9 610 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 NEK5Q6P3R8 708 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 DNAJC24Q6P3W2 148 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 NAXDQ8IW45 347 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 OR7D4Q8NG98 312 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 OR14C36Q8NHC7 312 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 PIP4K2CQ8TBX8 421 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 SNX19Q92543 992 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 ISG20Q96AZ6 181 aaKnown RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 CNPY3Q9BT09 278 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 MAGEH1Q9H213 219 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 TM7SF3Q9NS93 570 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 ARHGAP20Q9P2F6 1191 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 FNDC3AQ9Y2H6 1198 aaKnown RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 KMT2BQ9UMN6 2715 aaPredicted RBP12.33□□□□□ -0.44
COPB1-206ENST00000529210 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
COPB1-206ENST00000529210 A0A1W2PR77 199 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 FAM221BA6H8Z2 402 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 WASH4PA8MWX3 477 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 FLRT2O43155 660 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 SMAD6O43541 496 aaKnown RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 SH3BP5O60239 455 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 PCDHGA12O60330 932 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 CD160O95971 181 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 PRNPP04156 253 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 CTSLP07711 333 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 PLEKP08567 350 aaPredicted RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 PTMSP20962 102 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 RRM1P23921 792 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 CHRNA3P32297 505 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 HTR7P34969 479 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 METAP1P53582 386 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 GEMIN4P57678 1058 aaKnown RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 RPL7AP62424 266 aaKnown RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 ARF5P84085 180 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 PIP5KL1Q5T9C9 394 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 PLEKHA7Q6IQ23 1121 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 SLFN11Q7Z7L1 901 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 IQCHQ86VS3 1027 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 FNIP1Q8TF40 1166 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 ARHGEF2Q92974 986 aaKnown RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D31Q96DN5 1066 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
COPB1-206ENST00000529210 HDAC8Q9BY41 377 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 IL21RQ9HBE5 538 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 ATP13A1Q9HD20 1204 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 NDFIP2Q9NV92 336 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 PCOLCE2Q9UKZ9 415 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 DMTF1Q9Y222 760 aa12.32□□□□□ -0.44
COPB1-206ENST00000529210 FAM170AA1A519 330 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 ANKRD62A6NC57 917 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 EIF3CLB5ME19 914 aaKnown RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 FAM72CH0Y354 149 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 K7ERQ8 282 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 CCP110O43303 1012 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 RNGTTO60942 597 aaKnown RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 DKK1O94907 266 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 TNFAIP3P21580 790 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms