RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PCSK5Q92824 1860 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 TCRBV21S2A2A0A5A6 115 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 ESPNB1AK53 854 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 E5RJQ4 531 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 PES1O00541 588 aaKnown RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 MSI1O43347 362 aaKnown RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 PCDHGA12O60330 932 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 RFPL3O75679 317 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 IGLV3-27P01718 113 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 UCHL3P15374 230 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 ZNF18P17022 549 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 CHKAP35790 457 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 KLK7P49862 253 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 COPB1P53618 953 aaKnown RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 MYL5Q02045 173 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 PDCLQ13371 301 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 SYCP2LQ5T4T6 812 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 SYPL2Q5VXT5 272 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 BEND5Q7L4P6 421 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 RGL4Q8IZJ4 473 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 ALLCQ8N6M5 410 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 TERB1Q8NA31 727 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 GALNT6Q8NCL4 622 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 PIWIL1Q96J94 861 aaKnown RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 XPO6Q96QU8 1125 aaKnown RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 CPXM1Q96SM3 734 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 STK33Q9BYT3 514 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 GANQ9H2C0 597 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 ZDHHC4Q9NPG8 344 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 PLK2Q9NYY3 685 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 FTSJ1Q9UET6 329 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 LIMA1Q9UHB6 759 aaKnown RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 CLEC4EQ9ULY5 219 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 NAALADL1Q9UQQ1 740 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 SIK3Q9Y2K2 1263 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 STARD13Q9Y3M8 1113 aa8.77□□□□□ -1.01
SSBP3-212ENST00000528930 COL27A1Q8IZC6 1860 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-212ENST00000528930 TBC1D3BA6NDS4 549 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 PRRT4C9JH25 899 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 MEN1O00255 615 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 EPHB6O15197 1021 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 SART1O43290 800 aaKnown RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 SFTPCP11686 197 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 NCAM1P13591 858 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 CYP11B1P15538 503 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 GABRG2P18507 467 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 CDH5P33151 784 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 DGKGP49619 791 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 ACADVLP49748 655 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 RNF144AP50876 292 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 ERVPABLB-1P60509 514 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 EIF4EBP2Q13542 120 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 RAPGEF1Q13905 1077 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 TAF5Q15542 800 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 IGFBP7Q16270 282 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 ANO6Q4KMQ2 910 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 WDR45BQ5MNZ6 344 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 EOGTQ5NDL2 527 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 GRAMD4Q6IC98 578 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 CAVIN1Q6NZI2 390 aaKnown RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 DCBLD1Q8N8Z6 715 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 TXNDC5Q8NBS9 432 aaKnown RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 C1orf131Q8NDD1 294 aaKnown RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 RFFLQ8WZ73 363 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 BHMTQ93088 406 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 FAM149B1Q96BN6 582 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 SLC39A13Q96H72 371 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 PPP1R13BQ96KQ4 1090 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 FCRL2Q96LA5 508 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 PPP1R9BQ96SB3 815 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 BPIFA3Q9BQP9 254 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 FUCA2Q9BTY2 467 aa8.76□□□□□ -1.01
SSBP3-212ENST00000528930 DNAJC17Q9NVM6 304 aaKnown RBP8.76□□□□□ -1.01
SSBP3-212ENST00000528930 ZFC3H1O60293 1989 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 F8VZ95 297 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 TSPAN3O60637 253 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 KLF8O95600 359 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 LATS1O95835 1130 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 IGLV3-25P01717 112 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ERBB2P04626 1255 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ATP1A3P13637 1013 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 MAOBP27338 520 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 SLC6A4P31645 630 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 KRT9P35527 623 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 DCTP40126 519 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 HARS2P49590 506 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 TBX4P57082 545 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 JAM2P57087 298 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 BPIFB4P59827 614 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 YWHAZP63104 245 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 PITX1P78337 314 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 POU4F2Q12837 409 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 GEN1Q17RS7 908 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 PTPN20Q4JDL3 420 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 MPPE1Q53F39 396 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms