RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ZDHHC17Q8IUH5 632 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 MFN1Q8IWA4 741 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 ATP6V0D2Q8N8Y2 350 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
CPSF1-203ENST00000527916 OR4C6Q8NH72 309 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 ENOX1Q8TC92 643 aaKnown RBP10.83□□□□□ -0.68
CPSF1-203ENST00000527916 PRICKLE1Q96MT3 831 aaPredicted RBP10.83□□□□□ -0.68
CPSF1-203ENST00000527916 SLC2A13Q96QE2 648 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 CPXM1Q96SM3 734 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 ASCL3Q9NQ33 180 aa10.83□□□□□ -0.68
CPSF1-203ENST00000527916 TDRD6O60522 2096 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 EDDM13A0A1B0GTR0 161 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 KCNU1A8MYU2 1149 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 C10orf142B7Z368 130 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 LUC7L3O95232 432 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 MOCS3O95396 460 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 CKMT1AP12532 417 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 CD70P32970 193 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 CDH5P33151 784 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 NOS2P35228 1153 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 CSKP41240 450 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 DUSP3P51452 185 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 RPS24P62847 133 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 SLC12A1Q13621 1099 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 DCAF6Q58WW2 860 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 ZC3H12AQ5D1E8 599 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 C6orf132Q5T0Z8 1188 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 KLHDC7AQ5VTJ3 777 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 RNF219Q5W0B1 726 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 OLFML1Q6UWY5 402 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 ZNF574Q6ZN55 896 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 ATG14Q6ZNE5 492 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 RBM43Q6ZSC3 357 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 C11orf57Q6ZUT1 292 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 SLC26A9Q7LBE3 791 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 TMC6Q7Z403 805 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 SLC47A2Q86VL8 602 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 DEFB106AQ8N104 65 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 SLC25A45Q8N413 288 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 ZNF397Q8NF99 534 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 WFDC5Q8TCV5 224 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 GRAMD1AQ96CP6 724 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 PRMT1Q99873 361 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 NAA15Q9BXJ9 866 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 NUCKS1Q9H1E3 243 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 KDM4CQ9H3R0 1056 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 USP29Q9HBJ7 922 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 PLCB1Q9NQ66 1216 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 SAMSN1Q9NSI8 373 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 RRN3Q9NYV6 651 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 STIM2Q9P246 746 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 TJP2Q9UDY2 1190 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 AJAP1Q9UKB5 411 aaPredicted RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 INTS6Q9UL03 887 aaKnown RBP10.82□□□□□ -0.68
CPSF1-203ENST00000527916 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 CEP83Q9Y592 693 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 MYO9AB2RTY4 2548 aa10.82□□□□□ -0.68
CPSF1-203ENST00000527916 A0A1B0GVM2 712 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 PRAMEF26H0Y7S4 382 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 IL1BP01584 269 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 SRPRAP08240 638 aaKnown RBP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 TACR2P21452 398 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 DGKAP23743 735 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 CCR1P32246 355 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 SCNN1AP37088 669 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 GABRB2P47870 512 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 PLK1P53350 603 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 OXCT1P55809 520 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 SLC6A3Q01959 620 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 TAF5Q15542 800 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 SETMARQ53H47 684 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 FSCBQ5H9T9 825 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 COLEC12Q5KU26 742 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 TTC39BQ5VTQ0 682 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 LGI2Q8N0V4 545 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 CFAP52Q8N1V2 620 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 CARNMT1Q8N4J0 409 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 AADATQ8N5Z0 425 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 TMEM35BQ8NCS4 154 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 MYEOVQ96EZ4 313 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 KLHDC7BQ96G42 594 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 MYO19Q96H55 970 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 SLC46A1Q96NT5 459 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 STK33Q9BYT3 514 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 TRIM4Q9C037 500 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 KLHL11Q9NVR0 708 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 XPO7Q9UIA9 1087 aaKnown RBP10.81□□□□□ -0.68
CPSF1-203ENST00000527916 SATB2Q9UPW6 733 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 DAAM1Q9Y4D1 1078 aa10.81□□□□□ -0.68
CPSF1-203ENST00000527916 NBASA2RRP1 2371 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 NEMP2A6NFY4 417 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 TTC34A8MYJ7 566 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 F5H5T6 163 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 FFAR2O15552 330 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 SLC7A4O43246 635 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms