RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SLCO3A1Q9UIG8 710 aa14□□□□□ -0.17
CD44-224ENST00000526669 MRPS17Q9Y2R5 130 aaKnown RBP14□□□□□ -0.17
CD44-224ENST00000526669 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
CD44-224ENST00000526669 WASH3PC4AMC7 463 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 CES2O00748 559 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 PPP1R12AO14974 1030 aaPredicted RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 MCF2LO15068 1137 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 SMAD6O43541 496 aaKnown RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 MAFKO60675 156 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 KLF8O95600 359 aaPredicted RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 CD160O95971 181 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 ASLP04424 464 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 ATP5BP06576 529 aaKnown RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 DLDP09622 509 aaKnown RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 CHRNB1P11230 501 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 SRCP12931 536 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 PRLRP16471 622 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 MX2P20592 715 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 IL12RB1P42701 662 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 NR2C2P49116 596 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 SULT2A1Q06520 285 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 IL10RBQ08334 325 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 EIF4HQ15056 248 aaKnown RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 PDK1Q15118 436 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 PTPRNQ16849 979 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 ACCSLQ4AC99 568 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 PKN3Q6P5Z2 889 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 CCDC13Q8IYE1 715 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 ZNF687Q8N1G0 1237 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 ATP11CQ8NB49 1132 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 RPLP0P6Q8NHW5 317 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 HDAC11Q96DB2 347 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 MYO19Q96H55 970 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 QKIQ96PU8 341 aaKnown RBP eCLIP13.99□□□□□ -0.17
CD44-224ENST00000526669 CEP41Q9BYV8 373 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 PDFQ9HBH1 243 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 POLR3BQ9NW08 1133 aaPredicted RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 THAP10Q9P2Z0 257 aaPredicted RBP13.99□□□□□ -0.17
CD44-224ENST00000526669 DNPEPQ9ULA0 475 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 RAD54BQ9Y620 910 aa13.99□□□□□ -0.17
CD44-224ENST00000526669 A0A0A0MRY4 1105 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TMEM221A6NGB7 291 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TTC34A8MYJ7 566 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 M0R296 226 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 KCNK1O00180 336 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 PDE2AO00408 941 aaPredicted RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 BNIP3LO60238 219 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 TMCC1O94876 653 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 DCNP07585 359 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 RBP3P10745 1247 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 PRKCHP24723 683 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 KIR2DL1P43626 348 aaPredicted RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 ST8SIA6P61647 398 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 PPIDQ08752 370 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 LRRC32Q14392 662 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 KCTD19Q17RG1 926 aaPredicted RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 CWF19L1Q69YN2 538 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 RETSATQ6NUM9 610 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 DARS2Q6PI48 645 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 BZW1Q7L1Q6 419 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 CREG2Q8IUH2 290 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 CCDC105Q8IYK2 499 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 SH2D3CQ8N5H7 860 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 ALLCQ8N6M5 410 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TTC13Q8NBP0 860 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TXNDC5Q8NBS9 432 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 PJA1Q8NG27 643 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 ACTRT1Q8TDG2 376 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TFB1MQ8WVM0 346 aaKnown RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 MAIP1Q8WWC4 291 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 ACDQ96AP0 544 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TNKS2Q9H2K2 1166 aa13.98□□□□□ -0.17
CD44-224ENST00000526669 TTC7AQ9ULT0 858 aaPredicted RBP13.98□□□□□ -0.17
CD44-224ENST00000526669 SPAG17Q6Q759 2223 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 ZSCAN5CA6NGD5 496 aaPredicted RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 TIMM44O43615 452 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 TUBB4AP04350 444 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 SRPRAP08240 638 aaKnown RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 CHRM1P11229 460 aaPredicted RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 ALADP13716 330 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 CCNCP24863 283 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 RBL1P28749 1068 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 CLCN6P51797 869 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 NRLP54845 237 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 SLC10A7Q0GE19 358 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 ZBTB17Q13105 803 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 FZD5Q13467 585 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 LBRQ14739 615 aaKnown RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 PRKD1Q15139 912 aaPredicted RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 CYTH1Q15438 398 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 DLG2Q15700 870 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 DGKKQ5KSL6 1271 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
CD44-224ENST00000526669 TMCO4Q5TGY1 634 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 C22orf39Q6P5X5 142 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 SERPINA13PQ6UXR4 307 aa13.97□□□□□ -0.17
CD44-224ENST00000526669 CDKL3Q8IVW4 592 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms