RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ABCC13Q9NSE7 274 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 SPTLC3Q9NUV7 552 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 WDR35Q9P2L0 1181 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
NEDD8-204ENST00000526430 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.6
NEDD8-204ENST00000526430 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 SIGLEC16A6NMB1 481 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ENO4A6NNW6 628 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 NEDD8-MDP1E9PL57 170 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 I6L893 689 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 VILLO15195 856 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 KLK10O43240 276 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 GLI1P08151 1106 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 CISD3P0C7P0 127 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ACADMP11310 421 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 RFC1P35251 1148 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 NSFP46459 744 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 DGKGP49619 791 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 COPAP53621 1224 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 GALCP54803 685 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 INSM1Q01101 510 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 NFATC3Q12968 1075 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 MAMLD1Q13495 774 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 UBAP2LQ14157 1087 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 E2F5Q15329 346 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 TDRD12Q587J7 1177 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 EFHC1Q5JVL4 640 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 GATAD2AQ86YP4 633 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ZDHHC17Q8IUH5 632 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 EMC1Q8N766 993 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 DQX1Q8TE96 717 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ARHGEF26Q96DR7 871 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 NOX5Q96PH1 765 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 NPY6RQ99463 290 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ELF4Q99607 663 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 BBS2Q9BXC9 721 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 TRIM7Q9C029 511 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 C6orf106Q9H6K1 298 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 ANLNQ9NQW6 1124 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 STARD5Q9NSY2 213 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 SEPT11Q9NVA2 429 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 THAP10Q9P2Z0 257 aaPredicted RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 TDRD6O60522 2096 aaKnown RBP11.27□□□□□ -0.61
NEDD8-204ENST00000526430 CACNA1DQ01668 2161 aa11.27□□□□□ -0.61
NEDD8-204ENST00000526430 DOCK9Q9BZ29 2069 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 A0A0U1RQJ8 604 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 TMEM191CA6NGB0 347 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 C2CD4BA6NLJ0 364 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 GOLGA8SH3BPF8 625 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 SUV39H1O43463 412 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 SYNCRIPO60506 623 aaKnown RBP11.26□□□□□ -0.61
NEDD8-204ENST00000526430 TSPAN3O60637 253 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ENDOD1O94919 500 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 CYP1A2P05177 515 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ITGAVP06756 1048 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 CKMT2P17540 419 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ABCB4P21439 1286 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 EFEMP1Q12805 493 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 TRIP4Q15650 581 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-204ENST00000526430 CCDC14Q49A88 953 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 LAYNQ6UX15 382 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 Q6ZNB5 142 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 HTR3DQ70Z44 454 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ADAT2Q7Z6V5 191 aaKnown RBP11.26□□□□□ -0.61
NEDD8-204ENST00000526430 LRRC8AQ8IWT6 810 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ARHGAP18Q8N392 663 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ARFGAP1Q8N6T3 406 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 CENPIQ92674 756 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-204ENST00000526430 BIRC7Q96CA5 298 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ORAI3Q9BRQ5 295 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 ACE2Q9BYF1 805 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-204ENST00000526430 THAP2Q9H0W7 228 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 POPDC2Q9HBU9 364 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 FBXO10Q9UK96 956 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 SLC27A6Q9Y2P4 619 aa11.26□□□□□ -0.61
NEDD8-204ENST00000526430 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 SART1O43290 800 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 MSI1O43347 362 aaKnown RBP11.25□□□□□ -0.61
NEDD8-204ENST00000526430 HSF2BPO75031 334 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 DAB1O75553 588 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 STC2O76061 302 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CALB1P05937 261 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 TPM1P09493 284 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 RALAP11233 206 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 KRT10P13645 584 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 CR2P20023 1033 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 ACP1P24666 158 aa11.25□□□□□ -0.61
NEDD8-204ENST00000526430 ACSL1P33121 698 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms