RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 FLNBO75369 2602 aaKnown RBP6.75□□□□□ -1.33
CD44-221ENST00000526000 PTPRQQ9UMZ3 2332 aa6.75□□□□□ -1.33
CD44-221ENST00000526000 DOCK9Q9BZ29 2069 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 A0A0D9SEW6 157 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 POM121BA6NF01 834 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 C10orf142B7Z368 130 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 J3QKU1 62 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 K7ESM1 405 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 M0QYT0 321 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 TK2O00142 265 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 MCF2LO15068 1137 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 RAD51BO15315 384 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 SART1O43290 800 aaKnown RBP6.74□□□□□ -1.33
CD44-221ENST00000526000 ATP9BO43861 1147 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 SRGAP2O75044 1071 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 GADD45BO75293 160 aaPredicted RBP6.74□□□□□ -1.33
CD44-221ENST00000526000 PAGE1O75459 146 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 PIAS2O75928 621 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 GIMD1P0DJR0 217 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 SRCP12931 536 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 TFE3P19532 575 aaPredicted RBP6.74□□□□□ -1.33
CD44-221ENST00000526000 TGM2P21980 687 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 AKT2P31751 481 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 GKP32189 559 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 CCR1P32246 355 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 PLK1P53350 603 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 CETN1Q12798 172 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 ILKQ13418 452 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 SLC12A1Q13621 1099 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 KLHL40Q2TBA0 621 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 ZNF284Q2VY69 593 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 DEFB133Q30KQ1 61 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 ZSCAN23Q3MJ62 389 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 C3orf38Q5JPI3 329 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 RABGAP1LQ5R372 815 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 PIP5KL1Q5T9C9 394 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 BROXQ5VW32 411 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 LEKR1Q6ZMV7 388 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 TFAP2DQ7Z6R9 452 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 PHLDB2Q86SQ0 1253 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 TMEM110Q86TL2 294 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 TRIM69Q86WT6 500 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 RYBPQ8N488 228 aaPredicted RBP6.74□□□□□ -1.33
CD44-221ENST00000526000 SH2D3CQ8N5H7 860 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 NETO2Q8NC67 525 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 ZNF248Q8NDW4 579 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 OR4C6Q8NH72 309 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 SPATA20Q8TB22 786 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 IFI44Q8TCB0 444 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 MAPK15Q8TD08 544 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 LMX1AQ8TE12 382 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 KCNE4Q8WWG9 221 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 ATXN7L3BQ96GX2 97 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 BMFQ96LC9 184 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 GSDMAQ96QA5 445 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 MED15Q96RN5 788 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 CPXM1Q96SM3 734 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 PSMB7Q99436 277 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 IRX2Q9BZI1 471 aaPredicted RBP6.74□□□□□ -1.33
CD44-221ENST00000526000 CLSTN2Q9H4D0 955 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 ANLNQ9NQW6 1124 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 DYRK4Q9NR20 520 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 SATB2Q9UPW6 733 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 CTNND2Q9UQB3 1225 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 DMTF1Q9Y222 760 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 FARP1Q9Y4F1 1045 aaPredicted RBP6.74□□□□□ -1.33
CD44-221ENST00000526000 NBEAQ8NFP9 2946 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 BPTFQ12830 3046 aa6.74□□□□□ -1.33
CD44-221ENST00000526000 TDRD6O60522 2096 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 PLXNA2O75051 1894 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 LY6G6EA0A0G2JKS1 128 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 TEX51A0A1B0GUA7 166 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 A0A1W2PNU3 283 aaPredicted RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 IGLON5A6NGN9 336 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 PPP1R3GB7ZBB8 358 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 PSMA7O14818 248 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 MUSKO15146 869 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 SLC7A4O43246 635 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 MED7O43513 233 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 LEFTY1O75610 366 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 ERBB2P04626 1255 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 RHOCP08134 193 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 PNMA6AP0CW24 399 aaPredicted RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 SLC9A1P19634 815 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 ITIH2P19823 946 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 HNRNPA2B1P22626 353 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 RBMS1P29558 406 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 GNA15P30679 374 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 RPL34P49207 117 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 PCBP4P57723 403 aaKnown RBP6.73□□□□□ -1.33
CD44-221ENST00000526000 LRRC63Q05C16 580 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 OVGP1Q12889 678 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 PDCLQ13371 301 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 NNTQ13423 1086 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 STIM1Q13586 685 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 FGL2Q14314 439 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 COBLL1Q53SF7 1204 aa6.73□□□□□ -1.33
CD44-221ENST00000526000 C2CD6Q53TS8 623 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms