RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CPED1A4D0V7 1026 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 NEMP2A6NFY4 417 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 M0QYV0 167 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 BIN1O00499 593 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CASC3O15234 703 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 BNIP3LO60238 219 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 HNRNPA2B1P22626 353 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 AKT2P31751 481 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 SULT2A1Q06520 285 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 NNTQ13423 1086 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 DRAP1Q14919 205 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 ZNF284Q2VY69 593 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 LINC00303Q3SY05 128 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 ISM2Q6H9L7 571 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 LCLAT1Q6UWP7 414 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 UBR7Q8N806 425 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 DHTKD1Q96HY7 919 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 DUSP23Q9BVJ7 150 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 USP29Q9HBJ7 922 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 SLC25A13Q9UJS0 675 aa12.83□□□□□ -0.36
CCDC90B-205ENST00000525916 CHD5Q8TDI0 1954 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 MCF2LO15068 1137 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ALOX15BO15296 676 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 EFSO43281 561 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ATP9BO43861 1147 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 TNFSF15O95150 251 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 CALCAP01258 141 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 APOEP02649 317 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 CTSLP07711 333 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZNF18P17022 549 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 HNRNPKP61978 463 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZNF177Q13360 481 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 STIM1Q13586 685 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 SLC12A1Q13621 1099 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 DLG2Q15700 870 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 EDRF1Q3B7T1 1238 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ARL13BQ3SXY8 428 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZC3H12AQ5D1E8 599 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 CXorf57Q6NSI4 855 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZCCHC8Q6NZY4 707 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 RBM44Q6ZP01 1051 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 EFL1Q7Z2Z2 1120 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 PTAR1Q7Z6K3 402 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ABI3BPQ7Z7G0 1075 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 CLEC14AQ86T13 490 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZNF548Q8NEK5 533 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 FAM149B1Q96BN6 582 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 CCNL2Q96S94 520 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZSWIM1Q9BR11 485 aa12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZFR2Q9UPR6 939 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-205ENST00000525916 ZFC3H1O60293 1989 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 A6NNZ2 444 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 F5H5T6 163 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 RNF103O00237 685 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 PSMA7O14818 248 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 FBXO21O94952 628 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 BRD2P25440 801 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 PLK1P53350 603 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 CENPCQ03188 943 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 LRRC63Q05C16 580 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 LRMPQ12912 555 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 SRSF6Q13247 344 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 DEFB133Q30KQ1 61 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 DCAF17Q5H9S7 520 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 PERM1Q5SV97 790 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 SYPL2Q5VXT5 272 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 SEL1L3Q68CR1 1132 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 Q6ZSR6 202 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 ARL14Q8N4G2 192 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 ALG14Q96F25 216 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 IFT43Q96FT9 208 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 STARD5Q9NSY2 213 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 LRP4O75096 1905 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 LRRK1Q38SD2 2015 aa12.81□□□□□ -0.36
CCDC90B-205ENST00000525916 TCAF2A6NFQ2 919 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 RNF225M0QZC1 329 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 KPNA3O00505 521 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 STX10O60499 249 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms