RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 CNTN6Q9UQ52 1028 aa4.37□□□□□ -1.71
CSDE1-210ENST00000525878 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 BMPR1BO00238 502 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 HSPB6O14558 160 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 PIP5K1BO14986 540 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 DNPH1O43598 174 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 TMCC1O94876 653 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 HLA-DQA2P01906 255 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 SP1P08047 785 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 TRIM27P14373 513 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 PRKCHP24723 683 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 C5orf22Q49AR2 442 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 TEX45Q8NA69 505 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 HDAC7Q8WUI4 952 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 RSC1A1Q92681 617 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 IGSF21Q96ID5 467 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 FRG2BQ96QU4 278 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 SLC25A33Q9BSK2 321 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 GAREM1Q9H706 876 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 AGO1Q9UL18 857 aaKnown RBP4.36□□□□□ -1.71
CSDE1-210ENST00000525878 SLC39A10Q9ULF5 831 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 SRPRBQ9Y5M8 271 aaKnown RBP4.36□□□□□ -1.71
CSDE1-210ENST00000525878 MST1RQ04912 1400 aa4.36□□□□□ -1.71
CSDE1-210ENST00000525878 BUB3O43684 328 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 DAOP14920 347 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 TYK2P29597 1187 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 AKT1P31749 480 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 CDK7P50613 346 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 RCAN1P53805 252 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 OAZ1P54368 228 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 DDR1Q08345 913 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 SLC39A14Q15043 492 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 KIAA1324Q6UXG2 1013 aaKnown RBP4.35□□□□□ -1.71
CSDE1-210ENST00000525878 LILRB1Q8NHL6 650 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-210ENST00000525878 NODALQ96S42 347 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 HDHD5Q9BXW7 423 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 SDF2L1Q9HCN8 221 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 CEP83Q9Y592 693 aa4.35□□□□□ -1.71
CSDE1-210ENST00000525878 NOTCH3Q9UM47 2321 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 LINC01553A4QN01 128 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 AGAP5A6NIR3 686 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 CLDN7O95471 211 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 ENO3P13929 434 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-210ENST00000525878 CDH12P55289 794 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 RNASELQ05823 741 aaKnown RBP4.34□□□□□ -1.71
CSDE1-210ENST00000525878 SYTL3Q4VX76 610 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 EFHC1Q5JVL4 640 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 MTFR2Q6P444 385 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 ZNF771Q7L3S4 317 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-210ENST00000525878 FMNL3Q8IVF7 1028 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 PJA1Q8NG27 643 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 PRPF18Q99633 342 aaKnown RBP4.34□□□□□ -1.71
CSDE1-210ENST00000525878 LIN7CQ9NUP9 197 aaKnown RBP4.34□□□□□ -1.71
CSDE1-210ENST00000525878 SEL1LQ9UBV2 794 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 OSGIN2Q9Y236 505 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 SLC45A1Q9Y2W3 748 aa4.34□□□□□ -1.71
CSDE1-210ENST00000525878 C17orf102A2RUQ5 167 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 HEXIM1O94992 359 aaKnown RBP4.33□□□□□ -1.72
CSDE1-210ENST00000525878 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
CSDE1-210ENST00000525878 ZACNQ401N2 412 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 HIST2H2BCQ6DN03 193 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 MON1BQ7L1V2 547 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 C11orf96Q7Z7L8 435 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 TRIM74Q86UV6 250 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 TRIM73Q86UV7 250 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 SLC2A12Q8TD20 617 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 GFM1Q96RP9 751 aaKnown RBP4.33□□□□□ -1.72
CSDE1-210ENST00000525878 TCF7L2Q9NQB0 619 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 PCDHGB2Q9Y5G2 931 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 PCDHA10Q9Y5I2 948 aa4.33□□□□□ -1.72
CSDE1-210ENST00000525878 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 TMEM247A6NEH6 219 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 PRR23AA6NEV1 266 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 RNMTO43148 476 aaKnown RBP4.32□□□□□ -1.72
CSDE1-210ENST00000525878 ASNA1O43681 348 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 BTBD16Q32M84 506 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 TBRG1Q3YBR2 411 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 DSTYKQ6XUX3 929 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 SMIM29Q86T20 159 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 SERPINA11Q86U17 422 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 MIGA1Q8NAN2 632 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 FAR1Q8WVX9 515 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 HMGB4Q8WW32 186 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 PDE11AQ9HCR9 933 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 DONSONQ9NYP3 566 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 CDH22Q9UJ99 828 aa4.32□□□□□ -1.72
CSDE1-210ENST00000525878 KIF26BQ2KJY2 2108 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 ANO9A1A5B4 782 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 NPIPB13A6NJU9 1138 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 NPIPB5A8MRT5 1133 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 NPIPB4C9JG80 1138 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 GRM8O00222 908 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 SERPINI2O75830 405 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 DDAH2O95865 285 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 MYL3P08590 195 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 FCGR2AP12318 317 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 MXI1P50539 228 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 CLCNKBP51801 687 aa4.31□□□□□ -1.72
CSDE1-210ENST00000525878 CDK18Q07002 472 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms