RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SMARCC2Q8TAQ2 1214 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 PLEKHO2Q8TD55 490 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ST7LQ8TDW4 575 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GANCQ8TET4 914 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 IP6K1Q92551 441 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 EZH1Q92800 747 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 INTS4Q96HW7 963 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 C8orf76Q96K31 380 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 HIST1H2AHQ96KK5 128 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 RMDN2Q96LZ7 410 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 GDAP1L1Q96MZ0 367 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 PSMG3-AS1Q96PY0 264 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 HIST1H2AJQ99878 128 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 BCL7BQ9BQE9 202 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 CDADC1Q9BWV3 514 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 IMPG2Q9BZV3 1241 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 MS4A7Q9GZW8 240 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 SYTL2Q9HCH5 934 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 SLAMF7Q9NQ25 335 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 XPNPEP3Q9NQH7 507 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 IARS2Q9NSE4 1012 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 LIN7CQ9NUP9 197 aaKnown RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 TMEM184CQ9NVA4 438 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 SIRT5Q9NXA8 310 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 MPP6Q9NZW5 540 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 PIM2Q9P1W9 311 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 BTBD7Q9P203 1132 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 MBD1Q9UIS9 605 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 BAG5Q9UL15 447 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 TCFL5Q9UL49 500 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 RIMKLBQ9ULI2 386 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 NFU1Q9UMS0 254 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 NENFQ9UMX5 172 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 MTMR6Q9Y217 621 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 PLEKHM1Q9Y4G2 1056 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 LIPGQ9Y5X9 500 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 TEX264Q9Y6I9 313 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 V9GYY5 206 aaPredicted RBP4.62□□□□□ -1.67
CD44-213ENST00000525209 CNTNAP4Q9C0A0 1308 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 ADGRL1O94910 1474 aa4.62□□□□□ -1.67
CD44-213ENST00000525209 HECW2Q9P2P5 1572 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 A0A1B0GWJ7 208 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 DENND3A2RUS2 1198 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 NCF1BA6NI72 391 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 NCF1CA8MVU1 366 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 FOXO6A8MYZ6 492 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 C9orf172C9J069 976 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 H0YIN7 160 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CCDC188H7C350 402 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 H7C4K7 107 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 MYO1CO00159 1063 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 DLL1O00548 723 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 NFIBO00712 420 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 PPEF2O14830 753 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 SMAD6O43541 496 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 BUB1O43683 1085 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 NUDT21O43809 227 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 CCNT2O60583 730 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 PPP1R11O60927 126 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 ERLIN1O75477 346 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 AKAP3O75969 853 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 UNC5CO95185 931 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 KCNK5O95279 499 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 NPPAP01160 153 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CD1AP06126 327 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 TPM3P06753 285 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 SYPP08247 313 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 AHCYP23526 432 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CCR1P32246 355 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 MC5RP33032 325 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 IRAK1P51617 712 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CTXN1P60606 82 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 RAC3P60763 192 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CTAG1AP78358 180 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 MXRA7P84157 204 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 MEF2AQ02078 507 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 SOX4Q06945 474 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 GRSF1Q12849 480 aaKnown RBP eCLIP4.61□□□□□ -1.67
CD44-213ENST00000525209 THOC5Q13769 683 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 GALNT3Q14435 633 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 KCNAB1Q14722 419 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 EFTUD2Q15029 972 aaKnown RBP eCLIP4.61□□□□□ -1.67
CD44-213ENST00000525209 HADHQ16836 314 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 MST1LQ2TV78 715 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 TBRG1Q3YBR2 411 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CFAP221Q4G0U5 840 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 PREPLQ4J6C6 727 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 FILIP1LQ4L180 1135 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 LRRC23Q53EV4 343 aaPredicted RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 FBXO48Q5FWF7 155 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 RBM20Q5T481 1227 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 CLEC2AQ6UVW9 174 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 C15orf39Q6ZRI6 1047 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 KCTD9Q7L273 389 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 TRABD2AQ86V40 505 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 SPATA24Q86W54 205 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 LRRC49Q8IUZ0 686 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 DNAJC10Q8IXB1 793 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 KDM8Q8N371 416 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 RASGEF1CQ8N431 466 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms