RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FKBP1BP68106 108 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CFHR3Q02985 330 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF91Q05481 1191 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 PPATQ06203 517 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ST3GAL1Q11201 340 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 SPP2Q13103 211 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 KCNB1Q14721 858 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 SLC35G1Q2M3R5 365 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TMTC4Q5T4D3 741 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RUSC1-AS1Q66K80 236 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RGMBQ6NW40 437 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CASC1Q6TDU7 716 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 NPNTQ6UXI9 565 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RANBP10Q6VN20 620 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TMEM179Q6ZVK1 233 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 EPM2AIP1Q7L775 607 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ARMC9Q7Z3E5 817 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 MICU3Q86XE3 530 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ENAHQ8N8S7 591 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ZBTB34Q8NCN2 500 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 OR56A3Q8NH54 315 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 NCOA7Q8NI08 942 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 BRI3BPQ8WY22 251 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TRIM43Q96BQ3 446 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 JAKMIP1Q96N16 626 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 NEK1Q96PY6 1258 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TMEM47Q9BQJ4 181 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 B3GNT5Q9BYG0 378 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 AGXT2Q9BYV1 514 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 C22orf23Q9BZE7 217 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 UPF3BQ9BZI7 483 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CDH19Q9H159 772 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 FOXP1Q9H334 677 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CPVLQ9H3G5 476 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 LY9Q9HBG7 655 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TCP11L1Q9NUJ3 509 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 MGAT4CQ9UBM8 478 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 LPAR3Q9UBY5 353 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ABT1Q9ULW3 272 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ZHX2Q9Y6X8 837 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 IGKV2D-30A0A075B6S6 120 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CAPN8A6NHC0 703 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TSPY2A6NKD2 308 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 A8MVJ9 347 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ISM1B1AKI9 464 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 PYCARD-AS1I3L0S3 204 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 FRS3O43559 492 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 RGS10O43665 173 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 RRP9O43818 475 aaKnown RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CNMDO75829 334 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 RASAL1O95294 804 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 GOLGA8HP0CJ92 632 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 PDHBP11177 359 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 PCP11498 1178 aaKnown RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ATF7P17544 494 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 NF2P35240 595 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 AK2P54819 239 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 BACE1P56817 501 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ICA1Q05084 483 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TROAPQ12815 778 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 PPIL2Q13356 520 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 SEC23BQ15437 767 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 DEFB115Q30KQ5 88 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 MIDNQ504T8 468 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 AWAT1Q58HT5 328 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CACHD1Q5VU97 1274 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ZDHHC24Q6UX98 284 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 RUFY3Q7L099 469 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 OVCH2Q7RTZ1 564 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 UBE2Q1Q7Z7E8 422 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ERO1BQ86YB8 467 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ANKRD13BQ86YJ7 626 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TPH2Q8IWU9 490 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CHPFQ8IZ52 775 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF444Q8N0Y2 327 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 SPICE1Q8N0Z3 855 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ESR2Q92731 530 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 NMD3Q96D46 503 aaKnown RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 FAM122AQ96E09 287 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 WDYHV1Q96HA8 205 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 HIC2Q96JB3 615 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF668Q96K58 619 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 MARK4Q96L34 752 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CAPNS2Q96L46 248 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 C12orf42Q96LP6 360 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 LRGUKQ96M69 825 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TM6SF1Q9BZW5 370 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 KRT23Q9C075 422 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TMEM60Q9H2L4 133 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 RNF41Q9H4P4 317 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 VCPKMTQ9H867 229 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 FBXO28Q9NVF7 368 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 NYAP2Q9P242 653 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CLIP2Q9UDT6 1046 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 CTNNA3Q9UI47 895 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 MAD2L2Q9UI95 211 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TPCN1Q9ULQ1 816 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 STX8Q9UNK0 236 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TTC3P53804 2025 aa3.35□□□□□ -1.87
CSDE1-208ENST00000524652 NID2Q14112 1375 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms