RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CYP2S1Q96SQ9 504 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 KCNK16Q96T55 309 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 VAT1Q99536 393 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 TMEM121Q9BTD3 319 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 TRMT61BQ9BVS5 477 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 SEMA4AQ9H3S1 761 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 DHX35Q9H5Z1 703 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 BRD9Q9H8M2 597 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 USP29Q9HBJ7 922 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 XAB2Q9HCS7 855 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 ARHGEF4Q9NR80 690 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SLC2A4RGQ9NR83 387 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 OLA1Q9NTK5 396 aaKnown RBP7.26□□□□□ -1.25
VPS11-201ENST00000524454 WNT16Q9UBV4 365 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 SLC24A2Q9UI40 661 aa7.26□□□□□ -1.25
VPS11-201ENST00000524454 FAM170AA1A519 330 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 SHISA7A6NL88 538 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 E7EVH7 732 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 H0Y858 1186 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 RASGRF2O14827 1237 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 DCLK1O15075 740 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 POLR3GO15318 223 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 RGS16O15492 202 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 IRAK2O43187 625 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 GDF9O60383 454 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 FAM155BO75949 473 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NCAM1P13591 858 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 GLULP15104 373 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 PSMC3P17980 439 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 AOC1P19801 751 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 CDC25CP30307 473 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 RPL22P35268 128 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 MAGEA3P43357 314 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 MAGEA4P43358 317 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 MMP13P45452 471 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 KPNA1P52294 538 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 SLC5A3P53794 718 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 DYNLT1P63172 113 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 SH3BP2P78314 561 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 SARNPP82979 210 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 TCF15Q12870 199 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 SEMA5AQ13591 1074 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 KCNJ11Q14654 390 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 UBXN2BQ14CS0 331 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NR6A1Q15406 480 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 MLF2Q15773 248 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 KLHL38Q2WGJ6 581 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 LINC01559Q495D7 138 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 TMEM259Q4ZIN3 620 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 CCDC38Q502W7 563 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 DNAJC21Q5F1R6 531 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 BSPRYQ5W0U4 402 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NCBP2-AS2Q69YL0 99 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 HEATR6Q6AI08 1181 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 TRIM68Q6AZZ1 485 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 DARS2Q6PI48 645 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 RFX8Q6ZV50 586 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 GPRIN1Q7Z2K8 1008 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 YAF2Q8IY57 180 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 CMTM8Q8IZV2 173 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NUP93Q8N1F7 819 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 CCDC185Q8N715 623 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 ARL14EPQ8N8R7 260 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 SCAMP5Q8TAC9 235 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 TFB1MQ8WVM0 346 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 CPT1BQ92523 772 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 MRPS31Q92665 395 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 USP13Q92995 863 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 ARL8AQ96BM9 186 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 C1orf74Q96LT6 269 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 KCTD15Q96SI1 283 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 HINFPQ9BQA5 517 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NAT9Q9BTE0 207 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 CCDC134Q9H6E4 229 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 TASP1Q9H6P5 420 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 TRPV4Q9HBA0 871 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 SSU72Q9NP77 194 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 PIGVQ9NUD9 493 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 DDIT4Q9NX09 232 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 ARHGEF38Q9NXL2 777 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 EURLQ9NYK6 297 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NINJ2Q9NZG7 142 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 DTLQ9NZJ0 730 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 CWC15Q9P013 229 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 SLC12A6Q9UHW9 1150 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 TRHDEQ9UKU6 1024 aa7.25□□□□□ -1.25
VPS11-201ENST00000524454 NDRG2Q9UN36 371 aaKnown RBP7.25□□□□□ -1.25
VPS11-201ENST00000524454 A0A0A0MRY4 1105 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 WASH4PA8MWX3 477 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 H7C0C1 242 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 EEF2KO00418 725 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 PIK3R2O00459 728 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 FGF19O95750 216 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 IFNB1P01574 187 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 USP17L7P0C7H9 530 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 ARSAP15289 507 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 TARSP26639 723 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 CCR1P32246 355 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 AVPR1AP37288 418 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms