RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KCNU1A8MYU2 1149 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 TEX22C9J3V5 150 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 SPTLC2O15270 562 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 CEP104O60308 925 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 HSPA1AP0DMV8 641 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 HSPA1BP0DMV9 641 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 ATP5F1P24539 256 aaPredicted RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 ABCD3P28288 659 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 SLC16A2P36021 539 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 SRSF4Q08170 494 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 NEXNQ0ZGT2 675 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 FOXD4Q12950 439 aaPredicted RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 SEMA3AQ14563 771 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 SRSF7Q16629 238 aaKnown RBP eCLIP4.21□□□□□ -1.74
SKP1-212ENST00000523966 SMN1Q16637 294 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 KIAA1755Q5JYT7 1200 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 ATF7IPQ6VMQ6 1270 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 ZNF66Q6ZN08 573 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 R3HCC1LQ7Z5L2 792 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 YTHDF3Q7Z739 585 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 NEK8Q86SG6 692 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 PRIMA1Q86XR5 153 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 ANKRD13BQ86YJ7 626 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 CPXM2Q8N436 756 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 EXD3Q8N9H8 876 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 SAAL1Q96ER3 474 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 FRG2BQ96QU4 278 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 PHF7Q9BWX1 381 aaPredicted RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 HIPK3Q9H422 1215 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 PRDM13Q9H4Q3 707 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 SLC32A1Q9H598 525 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 MLXIPLQ9NP71 852 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 BABAM1Q9NWV8 329 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 CDH22Q9UJ99 828 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 CAMK2AQ9UQM7 478 aa4.21□□□□□ -1.74
SKP1-212ENST00000523966 LAS1LQ9Y4W2 734 aaKnown RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 FNDC1Q4ZHG4 1894 aaPredicted RBP4.21□□□□□ -1.74
SKP1-212ENST00000523966 TEX13CA0A0J9YWL9 993 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 C17orf113A0A1B0GUU1 675 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.2□□□□□ -1.74
SKP1-212ENST00000523966 FOXO6A8MYZ6 492 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 B4E171 279 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 TMCC1O94876 653 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 LATS1O95835 1130 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 SERPINC1P01008 464 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 CD4P01730 458 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 CTSAP10619 480 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 COX7A2P14406 83 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 KELP23276 732 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 YWHAQP27348 245 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 MAN1A1P33908 653 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 TSPAN7P41732 249 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 CTCFP49711 727 aaPredicted RBP4.2□□□□□ -1.74
SKP1-212ENST00000523966 CLCNKBP51801 687 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 NAP1L1P55209 391 aaKnown RBP4.2□□□□□ -1.74
SKP1-212ENST00000523966 YWHAZP63104 245 aaKnown RBP4.2□□□□□ -1.74
SKP1-212ENST00000523966 ZBTB16Q05516 673 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 PGM5Q15124 567 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 ZNF766Q5HY98 468 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 FAM180BQ6P0A1 224 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 CPLX4Q7Z7G2 160 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 MON1AQ86VX9 555 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 WDR5BQ86VZ2 330 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 CHD1LQ86WJ1 897 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 SETD9Q8NE22 299 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 NFKBIDQ8NI38 313 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 DDB2Q92466 427 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 DPF1Q92782 380 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 ELP4Q96EB1 424 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 C7orf26Q96N11 449 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 SIGLEC11Q96RL6 698 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 MPHOSPH8Q99549 860 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 PIMREGQ9BSJ6 248 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 QTRT1Q9BXR0 403 aaKnown RBP4.2□□□□□ -1.74
SKP1-212ENST00000523966 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 SLITRK6Q9H5Y7 841 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 AAMDCQ9H7C9 122 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 ZNF304Q9HCX3 659 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 ADARB2Q9NS39 739 aaKnown RBP4.2□□□□□ -1.74
SKP1-212ENST00000523966 TAS2R10Q9NYW0 307 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 PEMTQ9UBM1 199 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 AASSQ9UDR5 926 aa4.2□□□□□ -1.74
SKP1-212ENST00000523966 KIR2DS5A0A0G2JLQ3 304 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 KIR2DS3K7RE56 304 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 TP73O15350 636 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
SKP1-212ENST00000523966 NEURL1O76050 574 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 F9P00740 461 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 URODP06132 367 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 POU1F1P28069 291 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 RFC1P35251 1148 aaPredicted RBP4.19□□□□□ -1.74
SKP1-212ENST00000523966 CASP2P42575 452 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 MMP13P45452 471 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 UFM1P61960 85 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 EFNB1P98172 346 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 CFHR1Q03591 330 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 GAD2Q05329 585 aa4.19□□□□□ -1.74
SKP1-212ENST00000523966 DAZAP2Q15038 168 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms