RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TEAD4Q15561 434 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 MANEALQ5VSG8 457 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3GQ6DHY5 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3CQ6IPX1 549 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 ACAD10Q6JQN1 1059 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 IL27RAQ6UWB1 636 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 DSG4Q86SJ6 1040 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D3Q8IZP1 549 aaPredicted RBP19.13■□□□□ 0.65
SPIDR-220ENST00000522900 CHST14Q8NCH0 376 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 C3orf20Q8ND61 904 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 OSBPL2Q9H1P3 480 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 TNKS2Q9H2K2 1166 aa19.13■□□□□ 0.65
SPIDR-220ENST00000522900 ALOX15BO15296 676 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 ZNF821O75541 412 aaPredicted RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 PLEKP08567 350 aaPredicted RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 ACVRL1P37023 503 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 RACK1P63244 317 aaKnown RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 NRG1Q02297 640 aaPredicted RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 GNA12Q03113 381 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 C1QBPQ07021 282 aaKnown RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 TRIP6Q15654 476 aaKnown RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 ARL13BQ3SXY8 428 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 PRAMEF14Q5SWL7 426 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 FAM46CQ5VWP2 391 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
SPIDR-220ENST00000522900 ZNF783Q6ZMS7 281 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 NLRP14Q86W24 1093 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 DNAAF5Q86Y56 855 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 MCOLN2Q8IZK6 566 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 PYROXD2Q8N2H3 581 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 ATP13A1Q9HD20 1204 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 NEU3Q9UQ49 428 aa19.12■□□□□ 0.65
SPIDR-220ENST00000522900 LRRC53A6NM62 1247 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 H0Y8X5 98 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 VILLO15195 856 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 CCP110O43303 1012 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 CBFA2T3O75081 653 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 LRIG2O94898 1065 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 CD160O95971 181 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 ZNF883P0CG24 379 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 TNFAIP3P21580 790 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 CHRNA3P32297 505 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 CTSKP43235 329 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 TAS2R38P59533 333 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 ARF5P84085 180 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 PPP1R15BQ5SWA1 713 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 AGBL4Q5VU57 503 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 E4F1Q66K89 784 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-220ENST00000522900 DNAJC24Q6P3W2 148 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 DBX2Q6ZNG2 339 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 ADAT2Q7Z6V5 191 aaKnown RBP19.11■□□□□ 0.65
SPIDR-220ENST00000522900 SETD7Q8WTS6 366 aaKnown RBP19.11■□□□□ 0.65
SPIDR-220ENST00000522900 ARRDC3Q96B67 414 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 SCNM1Q9BWG6 230 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 ARHGAP20Q9P2F6 1191 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 DNAI1Q9UI46 699 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 PCOLCE2Q9UKZ9 415 aa19.11■□□□□ 0.65
SPIDR-220ENST00000522900 A0A1B0GTH6 734 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 A0A1W2PR77 199 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 TMCO5BA8MYB1 307 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 C1QTNF3-AMACRE9PGA6 284 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 PLRG1O43660 514 aaKnown RBP19.1■□□□□ 0.65
SPIDR-220ENST00000522900 HYAL3O43820 417 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-220ENST00000522900 CCDC172P0C7W6 258 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 RHOQP17081 205 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 MAT2AP31153 395 aaKnown RBP19.1■□□□□ 0.65
SPIDR-220ENST00000522900 ZNF143P52747 638 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-220ENST00000522900 OGDHQ02218 1023 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 SCYL2Q6P3W7 929 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 C22orf39Q6P5X5 142 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 DPY19L3Q6ZPD9 716 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 SERAC1Q96JX3 654 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 MCEEQ96PE7 176 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 ACE2Q9BYF1 805 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-220ENST00000522900 AASDHPPTQ9NRN7 309 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 MYO6Q9UM54 1294 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 BTBD3Q9Y2F9 522 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 FARP1Q9Y4F1 1045 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-220ENST00000522900 PCDHB9Q9Y5E1 797 aa19.1■□□□□ 0.65
SPIDR-220ENST00000522900 CACNA1EQ15878 2313 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 SYCE3A1L190 88 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 SLC7A4O43246 635 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 LATO43561 262 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 CLCN6P51797 869 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 C21orf59P57076 290 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 IL9RQ01113 521 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 HNRNPDQ14103 355 aaKnown RBP19.09■□□□□ 0.65
SPIDR-220ENST00000522900 NR1I3Q14994 352 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 ZNF423Q2M1K9 1284 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 FILIP1LQ4L180 1135 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 ARSIQ5FYB1 569 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 PIP5KL1Q5T9C9 394 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 RETSATQ6NUM9 610 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 SLFN11Q7Z7L1 901 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 CHCHD4Q8N4Q1 142 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 TMIEQ8NEW7 156 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 ARHGEF2Q92974 986 aaKnown RBP19.09■□□□□ 0.65
SPIDR-220ENST00000522900 NTAN1Q96AB6 310 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 TBC1D31Q96DN5 1066 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 KDM4CQ9H3R0 1056 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms