RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ITM2CQ9NQX7 267 aa6.5□□□□□ -1.37
PABPC1-220ENST00000522658 OLA1Q9NTK5 396 aaKnown RBP6.5□□□□□ -1.37
PABPC1-220ENST00000522658 TMEM30AQ9NV96 361 aa6.5□□□□□ -1.37
PABPC1-220ENST00000522658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.5□□□□□ -1.37
PABPC1-220ENST00000522658 MARCH2Q9P0N8 246 aa6.5□□□□□ -1.37
PABPC1-220ENST00000522658 NUDT5Q9UKK9 219 aa6.5□□□□□ -1.37
PABPC1-220ENST00000522658 SLC27A6Q9Y2P4 619 aa6.5□□□□□ -1.37
PABPC1-220ENST00000522658 PI4KAP42356 2102 aa6.5□□□□□ -1.37
PABPC1-220ENST00000522658 PKD1L2Q7Z442 2459 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 A0A087WV48 116 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 FAM92AA1XBS5 289 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 LRRC72A6NJI9 287 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 LRRIQ3A6PVS8 624 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 KCNJ18B7U540 433 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 SPTLC2O15270 562 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CALUO43852 315 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 PCDHGA12O60330 932 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 MOCS3O95396 460 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 POLR2EP19388 210 aaKnown RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 PRKCHP24723 683 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CD27P26842 260 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CFPP27918 469 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ACTN2P35609 894 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CASP4P49662 377 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ZBTB16Q05516 673 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 GEN1Q17RS7 908 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 KNOP1Q1ED39 458 aaKnown RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 BMT2Q1RMZ1 405 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 KIF19Q2TAC6 998 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ERICH6BQ5W0A0 696 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 LRFN4Q6PJG9 635 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CLEC20AQ6ZU45 233 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CHST9Q7L1S5 443 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CCDC186Q7Z3E2 898 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 OXR1Q8N573 874 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 TTC39CQ8N584 583 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 HPS3Q969F9 1004 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 IPO9Q96P70 1041 aaKnown RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 LGMNQ99538 433 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 OMDQ99983 421 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 XYLT2Q9H1B5 865 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 C6orf106Q9H6K1 298 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 CSNK1G1Q9HCP0 422 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ATP13A1Q9HD20 1204 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 SLC39A2Q9NP94 309 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 GDF3Q9NR23 364 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 IL37Q9NZH6 218 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 HESX1Q9UBX0 185 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 SUN2Q9UH99 717 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 SCML1Q9UN30 329 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-220ENST00000522658 PCDHGA1Q9Y5H4 931 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ST14Q9Y5Y6 855 aa6.49□□□□□ -1.37
PABPC1-220ENST00000522658 ZZEF1O43149 2961 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 MYH10P35580 1976 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 TEX51A0A1B0GUA7 166 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 H0Y8X5 98 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 TSPAN3O60637 253 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 MAGEC1O60732 1142 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 BEST1O76090 585 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 PENKP01210 267 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 IGLV3-19P01714 112 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 HLA-DRAP01903 254 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 PRB1P04280 392 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 HSP90AA1P07900 732 aaKnown RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 CELA3AP09093 270 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 C1SP09871 688 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 ACSL1P33121 698 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 SLC11A2P49281 568 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 COPAP53621 1224 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 UCNP55089 124 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 YWHAGP61981 247 aaKnown RBP eCLIP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 CXADRP78310 365 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 DAB2P98082 770 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 PDE4CQ08493 712 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 CDH18Q13634 790 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 SLC39A14Q15043 492 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 SMAD1Q15797 465 aaKnown RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 ZNF394Q53GI3 561 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 HES3Q5TGS1 186 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 LAYNQ6UX15 382 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 GPRIN1Q7Z2K8 1008 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 C12orf56Q8IXR9 622 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 SIX6OS1Q8N1H7 587 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 CPXM2Q8N436 756 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 ZNF366Q8N895 744 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 C12orf29Q8N999 325 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 BAHD1Q8TBE0 780 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 PARD3BQ8TEW8 1205 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 CYB5D2Q8WUJ1 264 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 SORCS1Q8WY21 1168 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 WBP2Q969T9 261 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 ELMO3Q96BJ8 720 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 KIRREL1Q96J84 757 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 HNRNPABQ99729 332 aaKnown RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 DDX50Q9BQ39 737 aaKnown RBP6.48□□□□□ -1.37
PABPC1-220ENST00000522658 CYP3A43Q9HB55 503 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 LRRC4Q9HBW1 653 aa6.48□□□□□ -1.37
PABPC1-220ENST00000522658 ABCB8Q9NUT2 735 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms