RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 EFHD2Q96C19 240 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 UNKQ9C0B0 810 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 KLHL25Q9H0H3 589 aa9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 MRPL40Q9NQ50 206 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 SUCOQ9UBS9 1254 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 SEPT3Q9UH03 358 aa9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 ZNF541Q9H0D2 1346 aa9.77□□□□□ -0.85
CTNNA1-230ENST00000521724 TMEM114B3SHH9 223 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 DYNC1LI2O43237 492 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MPSTP25325 297 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ADSLP30566 484 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MAGEA6P43360 314 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RPL14P50914 215 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 NME5P56597 212 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 BCAR1P56945 870 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PSME3P61289 254 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PRKCQQ04759 706 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 STILQ15468 1287 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TKFCQ3LXA3 575 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ZNF618Q5T7W0 954 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 HMBOX1Q6NT76 420 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 KCTD8Q6ZWB6 473 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CYS1Q717R9 158 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 SAMD3Q8N6K7 520 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TMCO5AQ8N6Q1 288 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PLD5Q8N7P1 536 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CNTD1Q8N815 330 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TFAP2BQ92481 460 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 LPGAT1Q92604 370 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 SLCO4A1Q96BD0 722 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RTP4Q96DX8 246 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MOCOSQ96EN8 888 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MTG1Q9BT17 334 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CISHQ9NSE2 258 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PCDHGC3Q9UN70 934 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 NOX1Q9Y5S8 564 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 BRWD3Q6RI45 1802 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 SAC3D1A6NKF1 404 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 FAM47E-STBD1D6RA91 191 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 METTL18O95568 372 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CCNE2O96020 404 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MYF6P23409 242 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TKTP29401 623 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 NIPAL4Q0D2K0 466 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 GALNT2Q10471 571 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MTMR1Q13613 665 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 HERC3Q15034 1050 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 OXA1LQ15070 435 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 KCNT2Q6UVM3 1135 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CAMK1DQ8IU85 385 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CADM3Q8N126 398 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CBR4Q8N4T8 237 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CPSF7Q8N684 471 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CLEC4DQ8WXI8 215 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ATXN7L3BQ96GX2 97 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CEP170P1Q96L14 293 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RNF157Q96PX1 679 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ADI1Q9BV57 179 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TMEM39BQ9GZU3 492 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 VPS33BQ9H267 617 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 EHD1Q9H4M9 534 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 AGO4Q9HCK5 861 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ACSS2Q9NR19 701 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ANKEF1Q9NU02 776 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TMEM9Q9P0T7 183 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 NXF1Q9UBU9 619 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 VPS51Q9UID3 782 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CCPG1Q9ULG6 757 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CDYLQ9Y232 598 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CPQQ9Y646 472 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ARID2Q68CP9 1835 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RNF103-CHMP3A0A140T963 221 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TCAF2A6NFQ2 919 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 E7ENX8 843 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PAPSS1O43252 624 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CLPXO76031 633 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 ALDH1A2O94788 518 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CLIC3O95833 236 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 EIF2S1P05198 315 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CD19P15391 556 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TFEBP19484 476 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CDH5P33151 784 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RCVRNP35243 200 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 GNL1P36915 607 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 MERTKQ12866 999 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 RALGDSQ12967 914 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 FAM117BQ6P1L5 589 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TAS1R3Q7RTX0 852 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PLD6Q8N2A8 252 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PQLC3Q8N755 202 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 CYGBQ8WWM9 190 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TOP1MTQ969P6 601 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 TAAR1Q96RJ0 339 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PEBP4Q96S96 227 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 APBA2Q99767 749 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 PDZD7Q9H5P4 517 aa9.76□□□□□ -0.85
CTNNA1-230ENST00000521724 SNX15Q9NRS6 342 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms