RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 KIAA0895LQ68EN5 471 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 NCEH1Q6PIU2 408 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 TMC6Q7Z403 805 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 DSG4Q86SJ6 1040 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 MINDY1Q8N5J2 469 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 ORAI3Q9BRQ5 295 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 ACE2Q9BYF1 805 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 ISCUQ9H1K1 167 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 ATP13A1Q9HD20 1204 aa18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 CNOT8Q9UFF9 292 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-211ENST00000521700 C10orf142B7Z368 130 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 PLK4O00444 970 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 ALOX15BO15296 676 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 KCNK5O95279 499 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 IGHV4-34P06331 123 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 KCNA4P22459 653 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 PSMA2P25787 234 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 MAPKAPK2P49137 400 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 ARF5P84085 180 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 SLC20A2Q08357 652 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 GRIK2Q13002 908 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 FAM46CQ5VWP2 391 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 RETSATQ6NUM9 610 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 OR2A12Q8NGT7 310 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 OR2T34Q8NGX1 318 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 PIP4K2CQ8TBX8 421 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 TRIM7Q9C029 511 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 XPO4Q9C0E2 1151 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 BZW2Q9Y6E2 419 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 CHD5Q8TDI0 1954 aa18.28■□□□□ 0.52
TRAPPC9-211ENST00000521700 LRRC72A6NJI9 287 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 ZNF821O75541 412 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 CD160O95971 181 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 GYPCP04921 128 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 CTSLP07711 333 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 CD27P26842 260 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 AIF1P55008 147 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 BNC1Q01954 994 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 ZNF252P-AS1Q0IIN9 211 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 POM121L1PQ3SYA9 428 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 TDRD12Q587J7 1177 aaKnown RBP18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 ARFGAP1Q8N6T3 406 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 CHST14Q8NCH0 376 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 OR14C36Q8NHC7 312 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 ARHGEF2Q92974 986 aaKnown RBP18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 FAM131CQ96AQ9 280 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 ZNF653Q96CK0 615 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 IQCDQ96DY2 449 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 MAGEH1Q9H213 219 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 TNKS2Q9H2K2 1166 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 EBF2Q9HAK2 575 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 TM9SF3Q9HD45 589 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 OSGEPQ9NPF4 335 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 LUC7L2Q9Y383 392 aaKnown RBP18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 ACTL7AQ9Y615 435 aa18.27■□□□□ 0.52
TRAPPC9-211ENST00000521700 NCOR2Q9Y618 2525 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 C1QTNF3-AMACRE9PGA6 284 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 GIPC1O14908 333 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 CREB3O43889 395 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 OPHN1O60890 802 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 SERPING1P05155 500 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 ADRB1P08588 477 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 DESP17661 470 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 EPHB2P29323 1055 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 CHRNA3P32297 505 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 ETFBP38117 255 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 CSNK1EP49674 416 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 SERPINH1P50454 418 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 ADPRHP54922 357 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 CNTN1Q12860 1018 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 SEMA3BQ13214 749 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 C22orf39Q6P5X5 142 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 ZDHHC5Q9C0B5 715 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 CEP44Q9C0F1 390 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 NOL6Q9H6R4 1146 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 DNAAF2Q9NVR5 837 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 MYO1AQ9UBC5 1043 aa18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 FARP1Q9Y4F1 1045 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-211ENST00000521700 A0A1W2PPC4 97 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 RNF103O00237 685 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 SLC7A4O43246 635 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 RAMP2O60895 175 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 GJB3O75712 270 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 MYBL1P10243 752 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 CSRP1P21291 193 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 CASP14P31944 242 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 NOVA1P51513 510 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 CCR5P51681 352 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 AFF3P51826 1226 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 POLD3Q15054 466 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 N4BP2L1Q5TBK1 243 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 PSAPL1Q6NUJ1 521 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 DPY19L3Q6ZPD9 716 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 RTL3Q8N8U3 475 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 TMIEQ8NEW7 156 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 FNIP1Q8TF40 1166 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 TRIM11Q96F44 468 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms