RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 NTN3O00634 580 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 LATO43561 262 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 DUX1O43812 170 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 TOM1L1O75674 476 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 PENKP01210 267 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 DNTTP04053 509 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 PDGFAP04085 211 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 LIFP15018 202 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 TRIM21P19474 475 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 BDNFP23560 247 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 TAF6P49848 677 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 ARSDP51689 593 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 CACNA2D1P54289 1103 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 PEX3P56589 373 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 NOP14P78316 857 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 CDK17Q00537 523 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 MYL7Q01449 175 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 ERCC6LQ2NKX8 1250 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 FYB2Q5VWT5 728 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 SERPINA13PQ6UXR4 307 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 C1orf186Q6ZWK4 172 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 SPATA2LQ8IUW3 424 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 SPATA3Q8NHX4 192 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 FUBP3Q96I24 572 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 IFT74Q96LB3 600 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 BHMT2Q9H2M3 363 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 PABPC3Q9H361 631 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 MTG2Q9H4K7 406 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 MMRN2Q9H8L6 949 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 KLHL11Q9NVR0 708 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 DDX43Q9NXZ2 648 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 PISDQ9UG56 409 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 MRFAP1Q9Y605 127 aa7.56□□□□□ -1.2
CTNNA1-227ENST00000521387 ARHGEF17Q96PE2 2063 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 CCDC169A6NNP5 214 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KPNA7A9QM74 516 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 EIF3CLB5ME19 914 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 SCAMP1O15126 338 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 XPOTO43592 962 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KIF5CO60282 957 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KIF20AO95235 890 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 PLEKP08567 350 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 GAP43P17677 238 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 MARSP56192 900 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 PPP2R3AQ06190 1150 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 ADAM9Q13443 819 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KNOP1Q1ED39 458 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 SMTNL2Q2TAL5 461 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 EDRF1Q3B7T1 1238 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 PRR30Q53SZ7 412 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 NAPEPLDQ6IQ20 393 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 DPY19L2P1Q6NXN4 242 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 USP30Q70CQ3 517 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 IQCHQ86VS3 1027 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 TRIM59Q8IWR1 403 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 TP53INP2Q8IXH6 220 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KCTD17Q8N5Z5 321 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 MNS1Q8NEH6 495 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNF397Q8NF99 534 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 NEK11Q8NG66 645 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 OR2T34Q8NGX1 318 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 UCMAQ8WVF2 138 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 USP7Q93009 1102 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 NKD1Q969G9 470 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 IQCDQ96DY2 449 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 EIF3CQ99613 913 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 EDEM3Q9BZQ6 932 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 FOXP3Q9BZS1 431 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 NHEJ1Q9H9Q4 299 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 EPB41L5Q9HCM4 733 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 CRTAC1Q9NQ79 661 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 FAM207AQ9NSI2 230 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 ZNHIT6Q9NWK9 470 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 FBXL12Q9NXK8 326 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 CGNQ9P2M7 1197 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 CHORDC1Q9UHD1 332 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 KCND3Q9UK17 655 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 TRAF3IP3Q9Y228 551 aa7.55□□□□□ -1.2
CTNNA1-227ENST00000521387 A0A1W2PP55 124 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 F8VP50 259 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 AGRPO00253 132 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 GABRDO14764 452 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CETN3O15182 167 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CLIC2O15247 247 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 TGFB1I1O43294 461 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 CALUO43852 315 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 TBCAO75347 108 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 FAM13AO94988 1023 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 NADKO95544 446 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 GNA14O95837 355 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 TBX18O95935 607 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 DRD2P14416 443 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 MUTP22033 750 aa7.54□□□□□ -1.2
CTNNA1-227ENST00000521387 ITGB7P26010 798 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms