RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PAFAH1B3Q15102 231 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 TBCCQ15814 346 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 DGKDQ16760 1214 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 CA9Q16790 459 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 INSCQ1MX18 579 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SLC5A9Q2M3M2 681 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SOWAHAQ2M3V2 549 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 TEX44Q53QW1 395 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 EFHC1Q5JVL4 640 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 OTUD1Q5VV17 481 aaPredicted RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 NCBP2-AS2Q69YL0 99 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 NOTUMQ6P988 496 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 LRRC8BQ6P9F7 803 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 KYAT3Q6YP21 454 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 UNC5AQ6ZN44 842 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 CLNKQ7Z7G1 428 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 PRPF39Q86UA1 669 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 CDR2LQ86X02 465 aaPredicted RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 RBM12BQ8IXT5 1001 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 VPS52Q8N1B4 723 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 TOP6BLQ8N6T0 577 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 FAM168AQ92567 244 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 PTPRN2Q92932 1015 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 NTAN1Q96AB6 310 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 TTC17Q96AE7 1141 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ZBTB10Q96DT7 871 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 PGAP3Q96FM1 320 aaPredicted RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 OXNAD1Q96HP4 312 aaPredicted RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 RSRC1Q96IZ7 334 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 SPATA13Q96N96 652 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 CSPG4P5Q96PW8 444 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SLC2A13Q96QE2 648 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SLC9A7Q96T83 725 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 HNRNPABQ99729 332 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 NAT9Q9BTE0 207 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 TSSK1BQ9BXA7 367 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 TBC1D10AQ9BXI6 508 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 CALN1Q9BXU9 219 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 BRD8Q9H0E9 1235 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ATXN3LQ9H3M9 355 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ABHD16BQ9H3Z7 469 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 C10orf88Q9H8K7 445 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 RNPEPL1Q9HAU8 725 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SMYD2Q9NRG4 433 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 MBNL3Q9NUK0 354 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 IGSF9Q9P2J2 1179 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SLC17A7Q9P2U7 560 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 BAIAP2L1Q9UHR4 511 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ADAMTS6Q9UKP5 1117 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 FZD10Q9ULW2 581 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SORCS3Q9UPU3 1222 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 LRRC42Q9Y546 428 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 DOCK3Q8IZD9 2030 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 NRCAMQ92823 1304 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 GOLGB1Q14789 3259 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 SCN10AQ9Y5Y9 1956 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 CAPN14A8MX76 684 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 CXorf49A8MYA2 514 aaPredicted RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 TRIM49D1C9J1S8 452 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 PDLIM1O00151 329 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 COPEO14579 308 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 EIF1AYO14602 144 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 GABRDO14764 452 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 PPEF2O14830 753 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 DCLK1O15075 740 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 CCDC22O60826 627 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 OPHN1O60890 802 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 CSDE1O75534 798 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 NPTXRO95502 500 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ANP32DO95626 131 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 GSRP00390 522 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 TPBGLP0DKB5 382 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 VAV1P15498 845 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ALOX15P16050 662 aaPredicted RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 FUT4P22083 530 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 CALB2P22676 271 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ADCYAP1R1P41586 468 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 MATKP42679 507 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 HCAR3P49019 387 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 TAF6P49848 677 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 RPS6KA3P51812 740 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 RAP1GDS1P52306 607 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ARFIP2P53365 341 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 YWHAGP61981 247 aaKnown RBP eCLIP5.18□□□□□ -1.58
SDC2-204ENST00000519914 FKBP1BP68106 108 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 IGBP1P78318 339 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ZNF33AQ06730 810 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ADCY1Q08828 1119 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 WASHC5Q12768 1159 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SEMA3BQ13214 749 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SEPT7Q16181 437 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 FAM110CQ1W6H9 321 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SLC25A52Q3SY17 297 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SV2CQ496J9 727 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 RAB6CQ53S08 254 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 TAF1BQ53T94 588 aaPredicted RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 FBXO47Q5MNV8 452 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 UBXN11Q5T124 520 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ARMC3Q5W041 872 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ATG16L1Q676U5 607 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms