RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 MYH15Q9Y2K3 1946 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 RGPD1P0DJD0 1748 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 TMEM247A6NEH6 219 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 BTN3A1O00481 513 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 HCRTO43612 131 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 KDM1AO60341 852 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 RTN3O95197 1032 aaPredicted RBP11.88□□□□□ -0.51
SYNPO-204ENST00000519664 HSPA1AP0DMV8 641 aaKnown RBP11.88□□□□□ -0.51
SYNPO-204ENST00000519664 HSPA1BP0DMV9 641 aaKnown RBP11.88□□□□□ -0.51
SYNPO-204ENST00000519664 HDAC4P56524 1084 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 LDB1Q86U70 411 aaPredicted RBP11.88□□□□□ -0.51
SYNPO-204ENST00000519664 SPATA22Q8NHS9 363 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 SERAC1Q96JX3 654 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 COG4Q9H9E3 785 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 CHKBQ9Y259 395 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 IPPQ9Y573 584 aa11.88□□□□□ -0.51
SYNPO-204ENST00000519664 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 MDM4O15151 490 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 MTA2O94776 668 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 FESP07332 822 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 HADHBP55084 474 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TAGAPQ8N103 731 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 FBXO39Q8N4B4 442 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 FCRL2Q96LA5 508 aaPredicted RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 DENND2DQ9H6A0 471 aaPredicted RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TBC1D13Q9NVG8 400 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 FBXO5Q9UKT4 447 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 PLLPQ9Y342 182 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 MYH13Q9UKX3 1938 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SLCO1B7G3V0H7 640 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 PQBP1O60828 265 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 PEX11AO75192 247 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TFEBP19484 476 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 MBTD1Q05BQ5 628 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 C12orf50Q8NA57 414 aaPredicted RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 FNDC5Q8NAU1 212 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 RBM15BQ8NDT2 890 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 WDR41Q9HAD4 459 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 ROBO1Q9Y6N7 1651 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TBKBP1A7MCY6 615 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 NFKBIEO00221 500 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 GSC2O15499 205 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 CRTAMO95727 393 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 HOXC6P09630 235 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 NELFEP18615 380 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 GSTT1P30711 240 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SERPINH1P50454 418 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 BLMHQ13867 455 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 FAM35AQ86V20 835 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 ZNF555Q8NEP9 628 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 BHLHE22Q8NFJ8 381 aaPredicted RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 METTL6Q8TCB7 284 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SERPINB11Q96P15 392 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TM6SF2Q9BZW4 377 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SYTL2Q9HCH5 934 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 BPIFA1Q9NP55 256 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 CROTQ9UKG9 612 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 CCNT2O60583 730 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TSPAN1O60635 241 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 BPGMP07738 259 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 AXLP30530 894 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 DLG2Q15700 870 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SLC25A52Q3SY17 297 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 AASDHQ4L235 1098 aaPredicted RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 C11orf96Q7Z7L8 435 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 C11orf74Q86VG3 221 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 ULK2Q8IYT8 1036 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 SEMA3CQ99985 751 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 DCUN1D5Q9BTE7 237 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 MMADHCQ9H3L0 296 aaPredicted RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 ACTR8Q9H981 624 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TLR8Q9NR97 1041 aaKnown RBP11.87□□□□□ -0.51
SYNPO-204ENST00000519664 TRPV2Q9Y5S1 764 aa11.87□□□□□ -0.51
SYNPO-204ENST00000519664 ATRNL1Q5VV63 1379 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 C2CD4BA6NLJ0 364 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 PPEF2O14830 753 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 METTL18O95568 372 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 SLC2A4P14672 509 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 DARSP14868 501 aaKnown RBP11.86□□□□□ -0.51
SYNPO-204ENST00000519664 MZF1P28698 734 aaPredicted RBP11.86□□□□□ -0.51
SYNPO-204ENST00000519664 CDK7P50613 346 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 CYP1B1Q16678 543 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 ZBTB46Q86UZ6 589 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 APBB2Q92870 758 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 PPP2R3CQ969Q6 453 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 RCN3Q96D15 328 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 FAR2Q96K12 515 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 KCTD15Q96SI1 283 aaPredicted RBP11.86□□□□□ -0.51
SYNPO-204ENST00000519664 ZNF358Q9NW07 568 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 AK5Q9Y6K8 562 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
SYNPO-204ENST00000519664 EVPLLA8MZ36 301 aa11.86□□□□□ -0.51
SYNPO-204ENST00000519664 MT-CYBP00156 380 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms