RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ZP2Q05996 745 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLK4-202ENST00000519132 TMEM62Q0P6H9 643 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 BNIP1Q12981 228 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 GPS1Q13098 491 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 GBP6Q6ZN66 633 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 LARP4Q71RC2 724 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLK4-202ENST00000519132 NANOGNBQ7Z5D8 188 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 TBC1D10CQ8IV04 446 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 MB21D2Q8IYB1 491 aaPredicted RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 PIP5K1AQ99755 562 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 IDI2Q9BXS1 227 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 NRDE2Q9H7Z3 1164 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 NOD2Q9HC29 1040 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 PDE7BQ9NP56 450 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 FLT1P17948 1338 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 AKR1B15C9JRZ8 316 aaPredicted RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 TNPO2O14787 897 aaKnown RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 RAD17O75943 681 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 TOX4O94842 621 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 STAMBPO95630 424 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 RRADP55042 308 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 NFATC3Q12968 1075 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 SP140Q13342 867 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 C12orf60Q5U649 245 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 GALNT18Q6P9A2 607 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 ETV3LQ6ZN32 361 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 YAF2Q8IY57 180 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 RNF168Q8IYW5 571 aaPredicted RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 SLC17A8Q8NDX2 589 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 CLMNQ96JQ2 1002 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 KRT23Q9C075 422 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 STN1Q9H668 368 aaKnown RBP7.56□□□□□ -1.2
CLK4-202ENST00000519132 KIF9Q9HAQ2 790 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 TMEM8AQ9HCN3 771 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 FAM53CQ9NYF3 392 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 TRIM17Q9Y577 477 aa7.56□□□□□ -1.2
CLK4-202ENST00000519132 GREB1LQ9C091 1923 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 F5H0A9 414 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 TUBBP07437 444 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 CIITAP33076 1130 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 PBX3P40426 434 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 EVCP57679 992 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 HAND2P61296 217 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 CDC42EP5Q6NZY7 148 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 SLC30A10Q6XR72 485 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 KIAA1524Q8TCG1 905 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 ZBED3Q96IU2 234 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 WDFY2Q96P53 400 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 MRI1Q9BV20 369 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 CPEB1Q9BZB8 566 aaKnown RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 TRIM4Q9C037 500 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 DNMT3BQ9UBC3 853 aaKnown RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 LOC102723971A0A1B0GUV8 181 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 MBD3L4A6NDZ8 208 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 MBD3L3A6NE82 208 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 TMEM221A6NGB7 291 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 ADAM20O43506 726 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 NEMFO60524 1076 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 SCG2P13521 617 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 PRLRP16471 622 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 IL11P20809 199 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 ZNF134P52741 427 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 EFR3AQ14156 821 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 BTG3Q14201 252 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 FKBP1CQ5VVH2 108 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 ARHGEF18Q6ZSZ5 1173 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 ANKS1BQ7Z6G8 1248 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 RALYLQ86SE5 291 aaKnown RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 MSANTD4Q8NCY6 345 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 GPR150Q8NGU9 434 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 WDR48Q8TAF3 677 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 MROH8Q9H579 483 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 DKK4Q9UBT3 224 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 CARD8Q9Y2G2 431 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLK4-202ENST00000519132 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.55□□□□□ -1.2
CLK4-202ENST00000519132 TIMM22Q9Y584 194 aa7.55□□□□□ -1.2
CLK4-202ENST00000519132 GOLGB1Q14789 3259 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 URADA6NGE7 173 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 PDLIM1O00151 329 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 AGFG2O95081 481 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 KRT10P13645 584 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 EPHA8P29322 1005 aaPredicted RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 TLX1P31314 330 aaPredicted RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 PPIDQ08752 370 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 GPS2Q13227 327 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 ACVR2BQ13705 512 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 COG2Q14746 738 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 STILQ15468 1287 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 MMEL1Q495T6 779 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 GOT1L1Q8NHS2 421 aaPredicted RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 CTCFLQ8NI51 663 aaPredicted RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 TP53INP1Q96A56 240 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 FAM120BQ96EK7 910 aaKnown RBP7.54□□□□□ -1.2
CLK4-202ENST00000519132 PEX11GQ96HA9 241 aa7.54□□□□□ -1.2
CLK4-202ENST00000519132 HRASLS5Q96KN8 279 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms