RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 KRT87PA6NCN2 255 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 AP3B1O00203 1094 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 UBE2CO00762 179 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 ZNF213O14771 459 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 CTAGE5O15320 804 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 ASAP2O43150 1006 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 FMO6PO60774 539 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 TJP3O95049 919 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 HEXBP07686 556 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 SNRNP70P08621 437 aaKnown RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 CSH1P0DML2 217 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 CSH2P0DML3 217 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 MYL4P12829 197 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 IFNAR1P17181 557 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 PBLDP30039 288 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 ARL3P36405 182 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 CCR9P51686 369 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 MC1RQ01726 317 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 MECOMQ03112 1051 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 YWHAHQ04917 246 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 SLC14A1Q13336 389 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 SHROOM1Q2M3G4 852 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 CTXN3Q4LDR2 81 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 CEP55Q53EZ4 464 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 CLEC9AQ6UXN8 241 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 MTERF4Q7Z6M4 381 aaKnown RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 CHD1LQ86WJ1 897 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 TAGAPQ8N103 731 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 KCTD6Q8NC69 237 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 SHC3Q92529 594 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 ZNF653Q96CK0 615 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 CABS1Q96KC9 395 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 COG8Q96MW5 612 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 BBC3Q96PG8 261 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 CCDC94Q9BW85 323 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 EIF2AQ9BY44 585 aaKnown RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 RWDD1Q9H446 243 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 EPS8L2Q9H6S3 715 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 ERVK-5Q9HDB9 667 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 PDE7BQ9NP56 450 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 TM7SF3Q9NS93 570 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 SH3BP4Q9P0V3 963 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 NKX1-2Q9UD57 310 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 CAB39Q9Y376 341 aaPredicted RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 MRPL11Q9Y3B7 192 aaKnown RBP6.24□□□□□ -1.41
SQLE-203ENST00000518931 COX11Q9Y6N1 276 aa6.24□□□□□ -1.41
SQLE-203ENST00000518931 TARM1B6A8C7 271 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 UBXN8O00124 270 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 CACNB4O00305 520 aaPredicted RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 PRPSAP2O60256 369 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SYNCRIPO60506 623 aaKnown RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 ERAL1O75616 437 aaKnown RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 JTBO76095 146 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 NDST3O95803 873 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 AFPP02771 609 aaKnown RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 TMIGD3P0DMS9 266 aaPredicted RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 GZMAP12544 262 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 CREB1P16220 341 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 YY1P25490 414 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 MTHFRP42898 656 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SULT1E1P49888 294 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 GPC3P51654 580 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SUMO2P61956 95 aaKnown RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 CYP4F2P78329 520 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 EPS8Q12929 822 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 MAMLD1Q13495 774 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 NAA25Q14CX7 972 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 ADIPOQQ15848 244 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 ALG11Q2TAA5 492 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 CAVIN4Q5BKX8 364 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SNX30Q5VWJ9 437 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SHQ1Q6PI26 577 aaKnown RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 MTHFD1LQ6UB35 978 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 USP49Q70CQ1 688 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 ZNF804AQ7Z570 1209 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 HERC6Q8IVU3 1022 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 FAM71BQ8TC56 605 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 OTUD7AQ8TE49 926 aaPredicted RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 CTHRC1Q96CG8 243 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 TMEM237Q96Q45 408 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 MACROD1Q9BQ69 325 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 ZCWPW1Q9H0M4 648 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SLC25A32Q9H2D1 315 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 LIN28AQ9H9Z2 209 aaKnown RBP6.23□□□□□ -1.41
SQLE-203ENST00000518931 ZBTB26Q9HCK0 441 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SEPT10Q9P0V9 454 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 LPAR3Q9UBY5 353 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 FEM1BQ9UK73 627 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 AMFRQ9UKV5 643 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 SLC27A6Q9Y2P4 619 aa6.23□□□□□ -1.41
SQLE-203ENST00000518931 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
SQLE-203ENST00000518931 MCF2LO15068 1137 aa6.22□□□□□ -1.41
SQLE-203ENST00000518931 KCNQ3O43525 872 aa6.22□□□□□ -1.41
SQLE-203ENST00000518931 KERAO60938 352 aa6.22□□□□□ -1.41
SQLE-203ENST00000518931 PROP1O75360 226 aa6.22□□□□□ -1.41
SQLE-203ENST00000518931 MTRF1O75570 445 aaKnown RBP6.22□□□□□ -1.41
SQLE-203ENST00000518931 BEST1O76090 585 aa6.22□□□□□ -1.41
SQLE-203ENST00000518931 LETM1O95202 739 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms