RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 ALLCQ8N6M5 410 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PCDH20Q8N6Y1 951 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PLD5Q8N7P1 536 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCDC89Q8N998 374 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KDM1BQ8NB78 822 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TXNDC5Q8NBS9 432 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TSTD1Q8NFU3 115 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KIF18AQ8NI77 898 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FAM71BQ8TC56 605 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 WFDC5Q8TCV5 224 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SORCS1Q8WY21 1168 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OR8D1Q8WZ84 308 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TSC1Q92574 1164 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ALG3Q92685 438 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FAF2Q96CS3 445 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MYEOVQ96EZ4 313 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PPP1R16AQ96I34 528 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CAPZA3Q96KX2 299 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RPL10LQ96L21 214 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GDAP1L1Q96MZ0 367 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PPP1R2P1Q96PQ5 205 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OSBPL9Q96SU4 736 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TLR10Q9BXR5 811 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CEP44Q9C0F1 390 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FBRSQ9HAH7 460 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FBRSL1Q9HCM7 1045 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RBM12Q9NTZ6 932 aaKnown RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RBM22Q9NW64 420 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CACNA2D2Q9NY47 1150 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GOLGA6AQ9NYA3 693 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 THAP10Q9P2Z0 257 aaPredicted RBP5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RNF14Q9UBS8 474 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SEPT3Q9UH03 358 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 VPS51Q9UID3 782 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CLEC4EQ9ULY5 219 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SNX12Q9UMY4 172 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF148Q9UQR1 794 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 STARD13Q9Y3M8 1113 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 STON1Q9Y6Q2 735 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DOCK6Q96HP0 2047 aa5.56□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CXorf51AA0A1B0GTR3 108 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CFAP69A5D8W1 941 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C3orf70A6NLC5 250 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TTC34A8MYJ7 566 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 E7EVH7 732 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 K7EQS6 105 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SGK1O00141 431 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DLL1O00548 723 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CES2O00748 559 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MAP3K13O43283 966 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MFSD11O43934 449 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MAP3K6O95382 1288 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 APBB3O95704 486 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 POP4O95707 220 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IL1BP01584 269 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRNPP04156 253 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RBP3P10745 1247 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CHRNB1P11230 501 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SRCP12931 536 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCNB1P14635 433 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRLRP16471 622 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 AOC1P19801 751 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IL4RP24394 825 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GARSP41250 739 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CTSOP43234 321 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MMP13P45452 471 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 STK19P49842 368 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SERPINH1P50454 418 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NRLP54845 237 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OTUD4Q01804 1114 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GBE1Q04446 702 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ZNF33AQ06730 810 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GALNT2Q10471 571 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 XRCC4Q13426 336 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SNX1Q13596 522 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TUBB2AQ13885 445 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HNRNPDQ14103 355 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GRM3Q14832 879 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GAB4Q2WGN9 574 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HNRNPA1L2Q32P51 320 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TTC31Q49AM3 519 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 INO80DQ53TQ3 878 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CARD16Q5EG05 197 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IER5LQ5T953 404 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EMC10Q5UCC4 262 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NAIF1Q69YI7 327 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ITPRIPL1Q6GPH6 555 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KIAA1324Q6UXG2 1013 aaKnown RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NPNTQ6UXI9 565 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ARHGEF18Q6ZSZ5 1173 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PID1Q7Z2X4 250 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KIAA0907Q7Z7F0 614 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCDC105Q8IYK2 499 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SH2D3CQ8N5H7 860 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PQLC3Q8N755 202 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MNS1Q8NEH6 495 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ACTL9Q8TC94 416 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 USP33Q8TEY7 942 aa5.55□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GRK7Q8WTQ7 553 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms