RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SLC5A5Q92911 643 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 CLPTM1LQ96KA5 538 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 ACAP3Q96P50 834 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 MESP1Q9BRJ9 268 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 ERVK-5Q9HDB9 667 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 ST6GALNAC1Q9NSC7 600 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 ZNF224Q9NZL3 707 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 CALCOCO1Q9P1Z2 691 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 TUBD1Q9UJT1 453 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 KCNS2Q9ULS6 477 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 FAF1Q9UNN5 650 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 STXBP5LQ9Y2K9 1186 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 SLC45A1Q9Y2W3 748 aa-0.65□□□□□ -2.51
RNU6-539P-201ENST00000516665 A0A087WUV0 522 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 SAC3D1A6NKF1 404 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 A8MVJ9 347 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 AGPSO00116 658 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 HAT1O14929 419 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 SGTAO43765 313 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 DUS4LO95620 317 aaKnown RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 ENO1P06733 434 aaKnown RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 HLA-DOBP13765 273 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 HGFP14210 728 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 SDSP20132 328 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 PRDX5P30044 214 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 HOXA13P31271 388 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 UQCRC1P31930 480 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 SOX5P35711 763 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 AVPR1AP37288 418 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 NKX2-1P43699 371 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 KRT17Q04695 432 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 FUT7Q11130 342 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 CCNIQ14094 377 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 EFNB3Q15768 340 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 MGAT5BQ3V5L5 792 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 HIGD2BQ4VC39 106 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 C2CD6Q53TS8 623 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 WDR38Q5JTN6 314 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 FBXO46Q6PJ61 603 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 CYB5R4Q7L1T6 521 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 YAF2Q8IY57 180 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 SCML4Q8N228 414 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 FAM47BQ8NA70 645 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 NGDNQ8NEJ9 315 aaKnown RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 C17orf47Q8NEP4 570 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 BPIFB1Q8TDL5 484 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 FCAMRQ8WWV6 532 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 PPP2R3CQ969Q6 453 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZNF354BQ96LW1 612 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 CSTL1Q9H114 145 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 ACBD3Q9H3P7 528 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 TRIM36Q9NQ86 728 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 ABHD10Q9NUJ1 306 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 FAM118AQ9NWS6 357 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 VDAC3Q9Y277 283 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 R3HCC1Q9Y3T6 440 aaKnown RBP-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 PLEKHM1Q9Y4G2 1056 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 RUSC2Q8N2Y8 1516 aa-0.66□□□□□ -2.52
RNU6-539P-201ENST00000516665 PDPK1O15530 556 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 SGPL1O95470 568 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 CH25HO95992 272 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 TFRCP02786 760 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 RFPL3SP0C7P2 107 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 ACADMP11310 421 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 CDH1P12830 882 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 MTHFD2P13995 350 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 EPHA3P29320 983 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 TIAL1Q01085 375 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 MEF2BQ02080 365 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZNF155Q12901 538 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 OLIG2Q13516 323 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 DNASE1L3Q13609 305 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 IL10RAQ13651 578 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 TUBB8Q3ZCM7 444 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 CCNYL2Q5T2Q4 361 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 GRHL2Q6ISB3 625 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 Q6P435 159 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZNF852Q6ZMS4 543 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 ZNF534Q76KX8 674 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 TRPT1Q86TN4 253 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 SKAP1Q86WV1 359 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 PLD3Q8IV08 490 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 ENTHD1Q8IYW4 607 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 DNAJB14Q8TBM8 379 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 TNPO1Q92973 898 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 OR1F2PQ96R84 312 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 CINPQ9BW66 212 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 ASB8Q9H765 288 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 RNF146Q9NTX7 359 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 PLCXD1Q9NUJ7 323 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 GNL3LQ9NVN8 582 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 INTS10Q9NVR2 710 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 AFF4Q9UHB7 1163 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 VPS4AQ9UN37 437 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 MSRB2Q9Y3D2 182 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 SRPRBQ9Y5M8 271 aaKnown RBP-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 KDM2BQ8NHM5 1336 aa-0.67□□□□□ -2.52
RNU6-539P-201ENST00000516665 IGHV3OR16-10A0A075B7F0 116 aa-0.68□□□□□ -2.52
RNU6-539P-201ENST00000516665 TRBV5-7A0A0A0MS05 114 aa-0.68□□□□□ -2.52
RNU6-539P-201ENST00000516665 CXorf65A6NEN9 183 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms