RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 VEGFAP15692 232 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHN1P15882 459 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SELEP16581 610 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HSPA6P17066 643 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SCP2P22307 547 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KCNA5P22460 613 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AKAP5P24588 427 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EEF1GP26641 437 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CERS1P27544 350 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RBL1P28749 1068 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EPHA3P29320 983 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ALDH4A1P30038 563 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LRPAP1P30533 357 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CORO1AP31146 461 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ICAM3P32942 547 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KRT9P35527 623 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TIMP3P35625 211 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AVPR1AP37288 418 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MLH1P40692 756 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MTNR1AP48039 350 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RGS19P49795 217 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 B3GALT5-AS1P59052 145 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CD81P60033 236 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 COG7P83436 770 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NDPQ00604 133 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CEBPZQ03701 1054 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC18A2Q05940 514 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SF3A3Q12874 501 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HDAC1Q13547 482 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DAG1Q14118 895 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RBM39Q14498 530 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IL13RA2Q14627 380 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLCB4Q15147 1175 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ASIC2Q16515 512 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PFKFB4Q16877 469 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM110CQ1W6H9 321 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SOWAHAQ2M3V2 549 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ALG11Q2TAA5 492 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SNAI3Q3KNW1 292 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TAF1BQ53T94 588 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SGO1Q5FBB7 561 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 XKR9Q5GH70 373 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 Q5PR19 223 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM240Q5SV17 173 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GPATCH4Q5T3I0 446 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C10orf62Q5T681 223 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC9C2Q5TAH2 1124 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAXCQ5TGI0 409 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM69BQ5VUD6 431 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BSPRYQ5W0U4 402 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARHGAP17Q68EM7 881 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TYW3Q6IPR3 259 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM53AQ6NSI3 398 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GFRALQ6UXV0 394 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C15orf39Q6ZRI6 1047 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C18orf65Q6ZTR6 163 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C9orf139Q6ZV77 190 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 H1FNTQ75WM6 255 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC26A9Q7LBE3 791 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KRT27Q7Z3Y8 459 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 WDR53Q7Z5U6 358 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PIM3Q86V86 326 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MOGAT3Q86VF5 341 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM219Q86XT9 240 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CPOQ8IVL8 374 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SFTPA1Q8IWL2 248 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TCEAL8Q8IYN2 117 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C16orf71Q8IYS4 520 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SCAIQ8N9R8 606 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC44A5Q8NCS7 719 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OR13A1Q8NGR1 328 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OR5R1Q8NH85 324 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TDRD7Q8NHU6 1098 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C11orf45Q8TAV5 145 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPPL3Q8TCT6 385 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CREB3L4Q8TEY5 395 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HMGB4Q8WW32 186 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ASB12Q8WXK4 309 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SEMA4DQ92854 862 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CD101Q93033 1021 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZKSCAN4Q969J2 545 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MUL1Q969V5 352 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF566Q969W8 418 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ANKRD9Q96BM1 317 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF524Q96C55 264 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GRAMD1AQ96CP6 724 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZBTB10Q96DT7 871 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RBM17Q96I25 401 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF845Q96IR2 970 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C18orf12Q96KH6 178 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SGCZQ96LD1 299 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF599Q96NL3 588 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PPP1R9BQ96SB3 815 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ATOH8Q96SQ7 321 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM118BQ9BPY3 351 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SENP7Q9BQF6 1050 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF577Q9BSK1 485 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CRB3Q9BUF7 120 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRMT61BQ9BVS5 477 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KATNAL1Q9BW62 490 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms