RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TMEM248Q9NWD8 314 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 ZDHHC7Q9NXF8 308 aa4.25□□□□□ -1.73
LINC01088-211ENST00000515597 NESP48681 1621 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 ABHD14A-ACY1A0A1B0GW23 586 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 GRM8O00222 908 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 LINC01565O15544 149 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 DDNO94850 711 aaPredicted RBP4.24□□□□□ -1.73
LINC01088-211ENST00000515597 PLGP00747 810 aaPredicted RBP4.24□□□□□ -1.73
LINC01088-211ENST00000515597 HLA-DQA2P01906 255 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 PKMP14618 531 aaKnown RBP4.24□□□□□ -1.73
LINC01088-211ENST00000515597 KLRC2P26717 231 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 CLCN5P51795 746 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 ART1P52961 327 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 ABATP80404 500 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 CDK18Q07002 472 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 PKP1Q13835 747 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 PUM3Q15397 648 aaKnown RBP4.24□□□□□ -1.73
LINC01088-211ENST00000515597 FAM171A1Q5VUB5 890 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 DCAF12L2Q5VW00 463 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 MTFR2Q6P444 385 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 GGT6Q6P531 493 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 KLHL17Q6TDP4 642 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 CADM3Q8N126 398 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 DPP10Q8N608 796 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 CMASQ8NFW8 434 aaPredicted RBP4.24□□□□□ -1.73
LINC01088-211ENST00000515597 PIGSQ96S52 555 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 HIPK3Q9H422 1215 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 ELAC1Q9H777 363 aaKnown RBP4.24□□□□□ -1.73
LINC01088-211ENST00000515597 NDUFAF4Q9P032 175 aa4.24□□□□□ -1.73
LINC01088-211ENST00000515597 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.23□□□□□ -1.73
LINC01088-211ENST00000515597 NPIPB13A6NJU9 1138 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 NPIPB5A8MRT5 1133 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 NPIPB4C9JG80 1138 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ACKR2O00590 384 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 HNRNPRO43390 633 aaKnown RBP4.23□□□□□ -1.73
LINC01088-211ENST00000515597 CYP21A2P08686 494 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 SERPINA4P29622 427 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
LINC01088-211ENST00000515597 CYP2J2P51589 502 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ERVFC1-1P60608 527 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ZP1P60852 638 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ICA1Q05084 483 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 RPS6KA2Q15349 733 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 C5orf22Q49AR2 442 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 OTUD1Q5VV17 481 aaPredicted RBP4.23□□□□□ -1.73
LINC01088-211ENST00000515597 TANGO2Q6ICL3 276 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 DGAT2L7PQ6IED9 249 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.23□□□□□ -1.733e-9■■■□□ 16.8
LINC01088-211ENST00000515597 PTGR2Q8N8N7 351 aaPredicted RBP4.23□□□□□ -1.73
LINC01088-211ENST00000515597 STT3BQ8TCJ2 826 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ADAMTS14Q8WXS8 1223 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 FRG2BQ96QU4 278 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 RMDN3Q96TC7 470 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 BRD8Q9H0E9 1235 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 KLHL31Q9H511 634 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ZNF556Q9HAH1 456 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 SLC25A13Q9UJS0 675 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 FZD10Q9ULW2 581 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 RCE1Q9Y256 329 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 ERCC6Q03468 1493 aa4.23□□□□□ -1.73
LINC01088-211ENST00000515597 TMEM247A6NEH6 219 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 FAM90A20PA6NIJ5 464 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 PRSS47A8MTI9 375 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 I6L893 689 aaPredicted RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 PPP1R3DO95685 299 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 UNGP13051 313 aaPredicted RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 TYK2P29597 1187 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 OS9Q13438 667 aaPredicted RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 ALKBH1Q13686 389 aaKnown RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 GXYLT1Q4G148 440 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 FAM76BQ5HYJ3 339 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 DNTTIP2Q5QJE6 756 aaKnown RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 FNBP1LQ5T0N5 605 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 TMEM71Q6P5X7 295 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 CCDC117Q8IWD4 279 aaPredicted RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 SCN4BQ8IWT1 228 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 SAMD3Q8N6K7 520 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 LRRC57Q8N9N7 239 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 ATG16L2Q8NAA4 619 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 ARRDC3Q96B67 414 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 CRB3Q9BUF7 120 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 DDX23Q9BUQ8 820 aaKnown RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 POLDIP3Q9BY77 421 aaKnown RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 TRIM31Q9BZY9 425 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 CDT1Q9H211 546 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 CATSPERBQ9H7T0 1116 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 TMLHEQ9NVH6 421 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 DACT1Q9NYF0 836 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 ERRFI1Q9UJM3 462 aaPredicted RBP4.22□□□□□ -1.73
LINC01088-211ENST00000515597 RAI2Q9Y5P3 530 aa4.22□□□□□ -1.73
LINC01088-211ENST00000515597 MST1RQ04912 1400 aa4.21□□□□□ -1.73
LINC01088-211ENST00000515597 A0A1B0GUV1 79 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 SMTNL1A8MU46 457 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 STMND1H3BQB6 276 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 LDB3O75112 727 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 TMCC1O94876 653 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 MYZAPP0CAP1 466 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 GNLYP22749 145 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 PRKCHP24723 683 aa4.21□□□□□ -1.74
LINC01088-211ENST00000515597 GSTM2P28161 218 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms